FracDimPy/.github/workflows/ci.yml at main · HCLEMINI/FracDimPy · GitHub

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name: CI/CD Pipeline

on:
  push:
    branches: [ main, develop ]
  pull_request:
    branches: [ main, develop ]

defaults:
  run:
    shell: bash

jobs:
  test:
    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest, windows-latest, macos-latest]
        python-version: [3.8, 3.9, "3.10", "3.11", "3.12"]
        exclude:
          # Reduce matrix size for faster CI
          - os: macos-latest
            python-version: 3.8
          - os: macos-latest
            python-version: 3.9

    steps:
    - uses: actions/checkout@v4
      with:
        lfs: true

    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}

    - name: Cache pip dependencies
      uses: actions/cache@v4
      with:
        path: |
          ~/.cache/pip
          ~/AppData/Local/pip/Cache
        key: ${{ runner.os }}-pip-${{ hashFiles('**/pyproject.toml') }}
        restore-keys: |
          ${{ runner.os }}-pip-

    - name: Install system dependencies (Ubuntu)
      if: matrix.os == 'ubuntu-latest'
      shell: bash
      run: |
        sudo apt-get install -y libglib2.0-0 libsm6 libxext6 libxrender-dev libgomp1

    - name: Install system dependencies (macOS)
      if: matrix.os == 'macos-latest'
      shell: bash
      run: |
        brew install libomp

    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        pip install wheel setuptools
        pip install -e .[dev]

    - name: Verify dependencies
      run: |
        python -c "import pytest; import numpy; import scipy; import matplotlib; print('Core dependencies OK')"

    - name: Verify package installation
      run: |
        python -c "import fracDimPy; print('FracDimPy version:', fracDimPy.__version__ if hasattr(fracDimPy, '__version__') else 'unknown')"

    - name: Quick functionality test
      run: |
        python -c "import fracDimPy; import numpy as np; data = np.random.randn(1000); from fracDimPy.monofractal import hurst_dimension; D, result = hurst_dimension(data); print(f'Basic test passed: Hurst exponent = {D:.3f}'); print('Core functionality verified')"

    - name: Lint with flake8
      continue-on-error: true
      run: |
        flake8 src --count --select=E9,F63,F7,F82 --show-source --statistics
        flake8 src --count --exit-zero --max-complexity=10 --max-line-length=100 --statistics

    - name: Type checking with mypy
      continue-on-error: true
      run: |
        mypy src/fracDimPy --ignore-missing-imports --no-strict-optional

    - name: Security check with bandit
      continue-on-error: true
      run: |
        bandit -r src/fracDimPy -f json -o bandit-report.json

    - name: Test with pytest
      run: |
        pytest tests/ -v --tb=short --cov=src/fracDimPy --cov-report=xml --cov-report=term-missing --cov-report=html

    - name: Upload coverage to Codecov
      if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.10'
      uses: codecov/codecov-action@v4
      with:
        file: ./coverage.xml
        flags: unittests
        name: codecov-umbrella
        fail_ci_if_error: false

  build:
    needs: test
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4

    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: '3.10'

    - name: Install build dependencies
      run: |
        python -m pip install --upgrade pip
        pip install build twine

    - name: Build package
      run: |
        python -m build

    - name: Check package
      run: |
        twine check dist/*

  docs:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4

    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: '3.10'

    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        pip install .[docs]
        pip install sphinx sphinx-rtd-theme sphinx-autodoc-typehints

    - name: Build documentation
      run: |
        cd docs
        make html

    - name: Upload documentation artifacts
      uses: actions/upload-artifact@v4
      with:
        name: documentation
        path: docs/_build/html/