Issues

• Which BioBERT version is best?

  dmis-lab/biobert#196 · Filter by author Asaad-Pak opened on Aug 3, 2024
  1

• Hope the files can be numbered to guide me in the order of reading.

  dmis-lab/biobert#195 · Filter by author KKKlingyanqiu123 opened on May 11, 2024

• vocab.txt内容是啥，如何进行定义。

  dmis-lab/biobert#194 · Filter by author nibaba007 opened on Apr 29, 2024

• Can the server run BioBERT without a GPU?

  dmis-lab/biobert#193 · Filter by author Liwanglili opened on Sep 18, 2023
  1

• The link of "this tool" is invalid

  dmis-lab/biobert#191 · Filter by author happycjksh opened on Aug 5, 2023
  1

• error :replicating biobert exactly with NCbI dataset

  dmis-lab/biobert#190 · Filter by author ayodejioogunseye opened on Jul 24, 2023
  1

• The Dataset link is invalid

  dmis-lab/biobert#189 · Filter by author Nick0821 opened on May 6, 2023
  6

• docker container and example notebook

  dmis-lab/biobert#187 · Filter by author skr3178 opened on Jan 12, 2023

• importing biobert_v1.1_pubmed ERROR 404: Not Found to Colab notebook

  dmis-lab/biobert#184 · Filter by author JaskaranKaurGill opened on Dec 3, 2022
  2

• Split for JNLPBA dataset.

  dmis-lab/biobert#181 · Filter by author siddharthtumre opened on Sep 4, 2022

• running the relation extraction model

  dmis-lab/biobert#180 · Filter by author engineernesma93 opened on Jun 26, 2022
  1

• How to "re-train" BioBert on a custom medical corpus?

  dmis-lab/biobert#176 · Filter by author peterphancong opened on Apr 17, 2022

• tokenizer.add_tokens() interfers with downstream NER task

  dmis-lab/biobert#175 · Filter by author laurens777 opened on Apr 7, 2022

• Why not filter out the [PAD] tokens when computing loss?

  dmis-lab/biobert#174 · Filter by author zdgithub opened on Mar 3, 2022

• How to use the RE model after training on GAD? I mean How to load the model and start to use it.??

  dmis-lab/biobert#173 · Filter by author uzair-balouch opened on Feb 22, 2022
  1

• What are the output files in OUTPUT_DIR after fine-tuning BioBERT for NER?

  dmis-lab/biobert#169 · Filter by author sbi30 opened on Oct 25, 2021
  1

• Registering at BioASQ website

  dmis-lab/biobert#167 · Filter by author parvathysarat opened on Aug 17, 2021
  1

• For custom RE dataset with entity marked in advanced

  dmis-lab/biobert#166 · Filter by author KennyNg-19 opened on Aug 17, 2021
  1

• Issues with tokenizers

  dmis-lab/biobert#163 · Filter by author galsk87 opened on May 2, 2021

• RE datasets

  dmis-lab/biobert#162 · Filter by author luana-be opened on Apr 8, 2021
  17

• Running biobert for pubmed classification on specific text

  dmis-lab/biobert#161 · Filter by author cartiksharma286 opened on Mar 24, 2021
  1

• Not able to replicate result available in readme

  dmis-lab/biobert#160 · Filter by author Shailendra77 opened on Mar 17, 2021

• Can BioBERT be used for multilabel classification problem ?

  dmis-lab/biobert#159 · Filter by author coolcoder001 opened on Mar 11, 2021
  3

• Provide QA BioASQ previous version

  dmis-lab/biobert#158 · Filter by author abdallah197 opened on Feb 1, 2021
  1

• NER: Model pre-trained for BertForTokenClassification task

  dmis-lab/biobert#156 · Filter by author mshtelma opened on Jan 25, 2021