diff --git a/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test.rds
index 43fab3e..5a1cb7d 100644
Binary files a/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test_markergenes.csv
index b034713..3036d2a 100644
--- a/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/doubletfinder/seurat_doubletfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,150 +1,160 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
-Ctxn1,1.0838460314578057e-12,1.0923668953473564,0.978,0.844,8.573222108831242e-10,3,seurat_doubletfinder_soupx_emptydrops_test
-Mef2c,1.3831734239458617e-10,1.6134747516264354,0.935,0.542,1.0940901783411767e-7,3,seurat_doubletfinder_soupx_emptydrops_test
-Fabp3,1.8474676509028544e-10,1.9052813427468616,0.587,0.135,1.4613469118641577e-7,3,seurat_doubletfinder_soupx_emptydrops_test
-Dok5,4.6272597750496984e-10,2.0207585601667977,0.739,0.344,3.660162482064312e-7,3,seurat_doubletfinder_soupx_emptydrops_test
-Fbn2,1.4331344899778255e-9,1.874522409940634,0.696,0.271,1.13360938157246e-6,3,seurat_doubletfinder_soupx_emptydrops_test
-Plxna4,9.393770255332706e-9,1.2260970313046449,0.913,0.734,7.430472271968171e-6,3,seurat_doubletfinder_soupx_emptydrops_test
-Selenow,1.0844273581892344e-8,0.693376035187327,1,0.984,8.577820403276846e-6,3,seurat_doubletfinder_soupx_emptydrops_test
-Car11,1.529423508373302e-7,2.3129393116601076,0.391,0.089,1.2097739951232816e-4,3,seurat_doubletfinder_soupx_emptydrops_test
-Bcat1,2.2309085880803577e-7,1.2166787701420545,0.739,0.318,1.764648693171563e-4,3,seurat_doubletfinder_soupx_emptydrops_test
-Noct,3.10313483347835e-7,1.7494565383494032,0.5,0.151,2.4545796532813744e-4,3,seurat_doubletfinder_soupx_emptydrops_test
-Tes,1.3846460928583823e-6,2.7394724497767804,0.261,0.042,0.00109525505945098,3,seurat_doubletfinder_soupx_emptydrops_test
-Crlf1,2.0790453387026264e-6,2.448423667773391,0.283,0.052,0.00164452486291377,3,seurat_doubletfinder_soupx_emptydrops_test
-Mettl22,4.371331239547648e-6,1.5208321633014406,0.457,0.146,0.00345772301048218,3,seurat_doubletfinder_soupx_emptydrops_test
-Tcf4,4.475383997833561e-6,-0.5712967534831686,1,1,0.00354002874228634,3,seurat_doubletfinder_soupx_emptydrops_test
-Slc6a6,4.831744796319411e-6,0.9963055164422584,0.804,0.432,0.00382191013388865,3,seurat_doubletfinder_soupx_emptydrops_test
-Grcc10,8.509090610231389e-6,0.6811738092121138,1,0.87,0.00673069067269302,3,seurat_doubletfinder_soupx_emptydrops_test
-Hsp90ab1,1.072587265187496e-5,0.4928324821936556,1,1,0.00848416526763309,3,seurat_doubletfinder_soupx_emptydrops_test
-Abr,1.3412403001311245e-5,0.8834827524683001,0.826,0.453,0.01060921077403719,3,seurat_doubletfinder_soupx_emptydrops_test
-Cdh13,1.651750878456272e-5,0.8094821710245234,0.63,0.271,0.01306534944858911,3,seurat_doubletfinder_soupx_emptydrops_test
-Prkar2b,2.0486378850207373e-5,0.9358696625802844,0.761,0.401,0.01620472567051403,3,seurat_doubletfinder_soupx_emptydrops_test
-Prr16,2.5363759622432943e-5,2.131789872555541,0.217,0.036,0.02006273386134446,3,seurat_doubletfinder_soupx_emptydrops_test
-Arhgap28,3.655868275377133e-5,1.67145402634813,0.391,0.125,0.02891791805823312,3,seurat_doubletfinder_soupx_emptydrops_test
-Grrp1,4.9572765143327257e-05,2.476438043942987,0.217,0.042,0.03921205722837186,3,seurat_doubletfinder_soupx_emptydrops_test
-Gad2,2.3150761489380195e-22,4.4693334765939845,0.652,0.081,1.8312252338099736e-19,1,seurat_doubletfinder_soupx_emptydrops_test
-Cntnap5c,1.5138021455370502e-14,4.873723731673319,0.439,0.047,1.197417497119807e-11,1,seurat_doubletfinder_soupx_emptydrops_test
-Sema3c,7.804117025311466e-11,-4.7638068198519905,0.045,0.506,6.173056567021369e-8,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpl13,8.070063562258633e-11,-0.6254510161029883,1,1,6.383420277746579e-8,1,seurat_doubletfinder_soupx_emptydrops_test
-Hsp90ab1,8.160521793201586e-11,-0.7692934379900063,1,1,6.454972738422454e-8,1,seurat_doubletfinder_soupx_emptydrops_test
-Tox2,3.9090930302958744e-10,4.469333476593984,0.273,0.017,3.092092586964037e-7,1,seurat_doubletfinder_soupx_emptydrops_test
-Mef2c,4.792384045298395e-10,1.344344624068155,0.879,0.517,3.79077577983103e-7,1,seurat_doubletfinder_soupx_emptydrops_test
-Snhg14,8.101605274261938e-10,1.5953849053336395,0.788,0.459,6.408369771941194e-7,1,seurat_doubletfinder_soupx_emptydrops_test
-Serf2,2.332603531400579e-9,-0.8783284697920117,0.939,0.971,1.845089393337858e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Insm1,2.402032659480136e-9,-2.3658747975758043,0.303,0.663,1.9000078336487876e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpl26,2.929433967113136e-9,-0.595242935311938,1,0.994,2.3171822679864903e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Lmo1,3.6437731198312406e-9,-2.636051272653618,0.121,0.541,2.8822245377865113e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Mmd2,3.7107711977883452e-9,-2.7660280597686686,0.106,0.535,2.9352200174505812e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Zfhx4,6.5549528901153725e-9,-3.2683833256292307,0.061,0.477,5.1849677360812594e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Zfp704,6.728038664860757e-9,1.4134407143445145,0.894,0.61,5.321878583904859e-6,1,seurat_doubletfinder_soupx_emptydrops_test
-Hnrnpa1,1.6455642345719012e-8,-0.6968329190015208,1,0.994,1.3016413095463735e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Rplp2,3.110713437462099e-8,-0.6616983795937545,0.985,0.994,2.460574329032521e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpl19,4.8032521075132954e-8,-0.5646628484335858,1,1,3.799372417043016e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpl5,6.106287101629173e-8,-0.7890750205741273,0.879,0.965,4.830073097388675e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Rian,8.805030789412549e-8,2.186474946385214,0.53,0.221,6.964779354425325e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Hivep3,9.982422570831173e-8,1.258387581908644,0.848,0.564,7.896096253527456e-5,1,seurat_doubletfinder_soupx_emptydrops_test
-Cdh11,2.1276803902735818e-7,2.703798730231007,0.485,0.192,1.682995188706403e-4,1,seurat_doubletfinder_soupx_emptydrops_test
-Eef1g,2.143142147945272e-7,-0.7235965156149149,0.939,0.983,1.6952254390247102e-4,1,seurat_doubletfinder_soupx_emptydrops_test
-Palmd,2.895821420015289e-7,-2.1053951914903783,0.106,0.477,2.290594743232093e-4,1,seurat_doubletfinder_soupx_emptydrops_test
-Gtf2a2,5.282741467793952e-7,-0.8379105725362652,0.667,0.878,4.178648501025016e-4,1,seurat_doubletfinder_soupx_emptydrops_test
-Gm4258,7.784300803550066e-7,1.1587749748799947,0.894,0.727,6.157381935608103e-4,1,seurat_doubletfinder_soupx_emptydrops_test
-Iqsec1,1.5076116607195214e-6,2.7511044450093634,0.424,0.163,0.00119252082362914,1,seurat_doubletfinder_soupx_emptydrops_test
-Reln,1.5979220398168284e-6,4.703798730231007,0.227,0.035,0.00126395633349511,1,seurat_doubletfinder_soupx_emptydrops_test
-2810013P06Rik,1.912099953477814e-6,-2.476110359783928,0.076,0.39,0.00151247106320095,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpl17,3.010139697156483e-6,-0.5401268526550824,1,0.988,0.00238102050045077,1,seurat_doubletfinder_soupx_emptydrops_test
-Rpsa,3.675014450117356e-6,-0.5928499562079974,1,1,0.00290693643004282,1,seurat_doubletfinder_soupx_emptydrops_test
-Spats2l,4.982116749857971e-6,2.76519927489515,0.303,0.081,0.00394085434913765,1,seurat_doubletfinder_soupx_emptydrops_test
-Arhgef12,5.739892511291018e-6,0.7229075531787116,0.894,0.709,0.00454025497643119,1,seurat_doubletfinder_soupx_emptydrops_test
-Snu13,6.572070930936938e-6,-0.8164580811023341,0.742,0.895,0.00519850810637111,1,seurat_doubletfinder_soupx_emptydrops_test
-Mrpl57,9.721268095235355e-6,-1.2229914228152166,0.258,0.599,0.00768952306333116,1,seurat_doubletfinder_soupx_emptydrops_test
-Idi1,1.2095787148578674e-5,-2.925557889848603,0.045,0.32,0.00956776763452573,1,seurat_doubletfinder_soupx_emptydrops_test
-Sst,1.5457730721134505e-5,7.404238448372099,0.106,0,0.01222706500041739,1,seurat_doubletfinder_soupx_emptydrops_test
-1110012L19Rik,2.5492454410309937e-5,-1.91929889937692,0.061,0.331,0.02016453143855516,1,seurat_doubletfinder_soupx_emptydrops_test
-Grcc10,3.381381415384306e-5,-0.6676576354862458,0.833,0.919,0.02674672699568986,1,seurat_doubletfinder_soupx_emptydrops_test
-Dok5,3.963893690916251e-5,-1.545278799248674,0.212,0.5,0.03135439909514755,1,seurat_doubletfinder_soupx_emptydrops_test
-Ltbp1,4.304775597437705e-5,-3.684218555114128,0.03,0.267,0.03405077497573224,1,seurat_doubletfinder_soupx_emptydrops_test
-Myt1l,1.966618482055987e-23,-3.323685433618551,0.458,0.995,1.5555952193062854e-20,2,seurat_doubletfinder_soupx_emptydrops_test
-Slco1c1,2.8136222420616755e-23,5.257911602016208,0.542,0.016,2.2255751934707857e-20,2,seurat_doubletfinder_soupx_emptydrops_test
-Pax6,1.4470160349272057e-19,4.1223966313597264,0.646,0.084,1.1445896836274195e-16,2,seurat_doubletfinder_soupx_emptydrops_test
-Ube2c,1.4569342719615525e-15,5.861410054174792,0.438,0.032,1.152435009121588e-12,2,seurat_doubletfinder_soupx_emptydrops_test
-Elk3,3.2106808593203656e-14,5.154818109052104,0.354,0.016,2.5396485597224093e-11,2,seurat_doubletfinder_soupx_emptydrops_test
-Rdm1,3.948944112207082e-14,4.73978060977326,0.354,0.016,3.1236147927558016e-11,2,seurat_doubletfinder_soupx_emptydrops_test
-Nde1,6.985105166378493e-14,4.080050340650132,0.458,0.053,5.525218186605388e-11,2,seurat_doubletfinder_soupx_emptydrops_test
-Rpl13,2.2655670152951825e-13,0.6465493761374095,1,1,1.792063509098489e-10,2,seurat_doubletfinder_soupx_emptydrops_test
-Phactr1,2.7213305653225733e-13,-1.7846771519883422,0.688,0.974,2.1525724771701552e-10,2,seurat_doubletfinder_soupx_emptydrops_test
-Cenpn,1.7573226823385052e-12,6.154818109052104,0.25,0,1.3900422417297574e-9,2,seurat_doubletfinder_soupx_emptydrops_test
-Mt2,2.8890029269659813e-12,6.114176124554758,0.271,0.005,2.285201315230091e-9,2,seurat_doubletfinder_soupx_emptydrops_test
-Rpl26,8.532478555098416e-12,0.709206043580755,1,0.995,6.749190537082847e-9,2,seurat_doubletfinder_soupx_emptydrops_test
-Psrc1,2.4537800794101734e-11,4.186526968779442,0.312,0.021,1.940940042813447e-8,2,seurat_doubletfinder_soupx_emptydrops_test
-Ltbp1,6.089472335293401e-11,2.4918530963296748,0.542,0.116,4.81677261721708e-8,2,seurat_doubletfinder_soupx_emptydrops_test
-Tpbg,2.32348412184007e-10,3.9108925261660143,0.292,0.021,1.8378759403754954e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Sgo2a,2.6091952055009547e-10,4.6853328257508835,0.229,0.005,2.0638734075512553e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Fancd2,2.988390241876304e-10,4.399930606888636,0.25,0.011,2.3638166813241565e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Fnbp1l,5.035859470977299e-10,-1.2593256761798346,0.708,0.974,3.983364841543043e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Ctxn1,8.56759902049134e-10,-1.306228940496396,0.667,0.921,6.776970825208651e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Rpsa,1.1406608678513727e-9,0.7569644951280532,1,1,9.022627464704358e-7,2,seurat_doubletfinder_soupx_emptydrops_test
-Gprc5b,1.817875914101787e-9,2.546771995217907,0.458,0.1,1.4379398480545135e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Hes1,2.2357817992222096e-9,5.939089417996667,0.208,0.005,1.7685034031847678e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Dlgap5,2.884880742894764e-9,4.154818109052104,0.229,0.011,2.2819406676297584e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Serf2,3.2041360224171703e-9,0.8859040129784248,0.979,0.958,2.534471593731982e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Mef2c,3.292094790886614e-9,-3.450493037060854,0.292,0.7,2.604046979591312e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Cenpu,9.139355336493424e-9,3.487393448138975,0.271,0.026,7.229230071166299e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Gypc,1.1467941674687276e-8,5.154818109052104,0.167,0,9.071141864677635e-6,2,seurat_doubletfinder_soupx_emptydrops_test
-Shisa2,2.521161920183034e-8,3.100370325029727,0.229,0.016,1.99423907886478e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Nyap2,2.6413787554451987e-8,-3.80300945178164,0.062,0.505,2.089330595557152e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Plxna4,3.508477510000883e-8,-2.1278070251395707,0.521,0.832,2.7752057104106987e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Dpysl2,5.4618135183157143e-8,-0.9189887381263888,0.896,0.979,4.3202944929877296e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Ccnd1,6.842307673720099e-8,3.9390894179966662,0.25,0.026,5.412265369912597e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Zfp704,8.76399350446197e-8,-1.606923064152427,0.396,0.763,6.932318862029417e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Sash1,1.0577030156574357e-7,2.792248029667396,0.292,0.042,8.366430853850317e-5,2,seurat_doubletfinder_soupx_emptydrops_test
-Clic4,1.682015111592899e-7,1.3673627444322047,0.75,0.321,1.3304739532699828e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Gins2,1.713755445244602e-7,4.306821202497154,0.188,0.011,1.3555805571884805e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Rpl19,2.048480793380159e-7,0.5424583732858506,1,1,1.6203483075637057e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Nexmif,2.3625901259998725e-7,-2.450493037060854,0.125,0.553,1.868808789665899e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Hivep3,2.7681434544102124e-7,-1.7636944061979387,0.312,0.726,2.1896014724384784e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Snhg14,2.874681405356419e-7,-2.315661336485004,0.271,0.621,2.2738729916369277e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Prkar2b,2.9651420816775833e-7,-2.4962335821268247,0.146,0.553,2.3454273866069684e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Hnrnpa1,3.748071993180185e-7,0.58451591503708,1,0.995,2.9647249466055263e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Cep170,8.803466815678595e-7,-1.3172265061973905,0.5,0.805,6.963542251201768e-4,2,seurat_doubletfinder_soupx_emptydrops_test
-Sept9,1.3270883162498118e-6,1.5254614889724945,0.562,0.216,0.0010497268581536,2,seurat_doubletfinder_soupx_emptydrops_test
-Ccnf,1.3652531501675465e-6,4.487393448138975,0.167,0.011,0.00107991524178252,2,seurat_doubletfinder_soupx_emptydrops_test
-Cdca5,1.4277058839011335e-6,4.569855608330948,0.146,0.005,0.00112931535416579,2,seurat_doubletfinder_soupx_emptydrops_test
-Jakmip2,1.7784810085229231e-6,-1.7623408220102414,0.333,0.668,0.00140677847774163,2,seurat_doubletfinder_soupx_emptydrops_test
-Srebf1,2.0033101668193424e-6,2.3999306068886357,0.333,0.079,0.0015846183419541,2,seurat_doubletfinder_soupx_emptydrops_test
-Tead1,2.109257422519879e-6,0.9796753983387724,0.875,0.568,0.00166842262121322,2,seurat_doubletfinder_soupx_emptydrops_test
-Nhp2,2.2115859670976262e-6,1.1626802268250744,0.75,0.442,0.00174936449997422,2,seurat_doubletfinder_soupx_emptydrops_test
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+Gypc,2.674135667781818e-9,5.326274500277776,0.19,0,2.136634398557673e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Zfp704,3.801037448753847e-9,-1.4721973008238425,0.379,0.765,3.037028921554324e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Rpsa,3.8454395002436206e-9,0.742182824138435,0.983,1,3.0725061606946527e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Snhg14,3.936379952295831e-9,-2.7615671502279597,0.19,0.598,3.145167581884368e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Hivep3,4.4125554992026725e-9,-1.9238992302734903,0.276,0.721,3.5256318438629353e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Gprc5b,5.15147451926001e-9,2.4738316886916345,0.431,0.101,4.1160281408887485e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Clic4,1.1725793222967034e-8,1.3628003763028902,0.776,0.33,9.36890878515066e-6,2,seurat_doubletfinder_soupx_emptydrops_test
+Tmeff1,1.8047366135681225e-8,-1.3190236636708546,0.552,0.849,1.4419845542409296e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Usp22,2.0030857053202632e-8,-1.192718346525784,0.655,0.844,1.6004654785508903e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Rpl19,2.0586622753689972e-8,0.564460625902361,1,1,1.6448711580198284e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Cenpu,2.4822372088816425e-8,3.403442360800237,0.276,0.034,1.983307529896432e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Metrn,3.284611120070104e-8,4.288799794859114,0.19,0.006,2.6244042849360133e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Tcf7l1,3.9317928699375694e-8,3.3262745002777763,0.259,0.028,3.141502503080117e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Fancd2,3.9884754201967314e-8,3.8737622955802697,0.224,0.017,3.1867918607371876e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Ltbp1,5.945819651856418e-8,2.147371902716207,0.483,0.145,4.750709901833278e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Klhl13,1.2012751529247165e-7,1.4223013880515525,0.379,0.084,9.598188471868486e-5,2,seurat_doubletfinder_soupx_emptydrops_test
+Jakmip2,1.7739994853207305e-7,-1.8177718693389304,0.328,0.67,1.4174255887712637e-4,2,seurat_doubletfinder_soupx_emptydrops_test
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+Ccnf,8.090128075746253e-7,4.161887682376894,0.207,0.022,6.464012332521256e-4,2,seurat_doubletfinder_soupx_emptydrops_test
+Gins2,1.1084050939125569e-6,3.713297623387024,0.19,0.017,8.856156700361328e-4,2,seurat_doubletfinder_soupx_emptydrops_test
+Srebf1,1.139988231618801e-6,2.4925682512732203,0.328,0.078,9.10850597063422e-4,2,seurat_doubletfinder_soupx_emptydrops_test
+Cep170,2.3006249653226347e-6,-1.1564291589580893,0.569,0.804,0.00183819934729278,2,seurat_doubletfinder_soupx_emptydrops_test
+Sash1,2.7103353559384017e-6,2.625834782136684,0.241,0.039,0.00216555794939478,2,seurat_doubletfinder_soupx_emptydrops_test
+Mrpl39,3.96234082703819e-6,1.2779114787163772,0.569,0.246,0.00316591032080351,2,seurat_doubletfinder_soupx_emptydrops_test
+Cdh13,4.655574644626933e-6,-3.790329382596444,0.069,0.385,0.00371980414105691,2,seurat_doubletfinder_soupx_emptydrops_test
+Gabbr1,5.378505280735306e-6,-1.4143223443352986,0.414,0.676,0.0042974257193075,2,seurat_doubletfinder_soupx_emptydrops_test
+Shisa2,6.371696798589407e-6,2.5189195782201725,0.19,0.022,0.00509098574207293,2,seurat_doubletfinder_soupx_emptydrops_test
+Cdca5,6.47030105986803e-6,3.5327253777452032,0.155,0.011,0.00516977054683455,2,seurat_doubletfinder_soupx_emptydrops_test
+Rab28,7.857396811771841e-6,1.1303073649974726,0.621,0.313,0.0062780600526057,2,seurat_doubletfinder_soupx_emptydrops_test
+Nsl1,7.885576495871856e-6,2.7633383058866197,0.155,0.011,0.00630057562020161,2,seurat_doubletfinder_soupx_emptydrops_test
+Rpl5,9.672239806851107e-6,0.5771856194289677,1,0.922,0.00772811960567403,2,seurat_doubletfinder_soupx_emptydrops_test
+Rpl17,1.0251735345299882e-5,0.48678909357834366,1,0.983,0.0081911365408946,2,seurat_doubletfinder_soupx_emptydrops_test
+Dera,1.0279370200501482e-5,2.073293759107906,0.241,0.045,0.00821321679020068,2,seurat_doubletfinder_soupx_emptydrops_test
+Pdzd11,1.0646727185325028e-5,1.1291588138334832,0.69,0.391,0.00850673502107469,2,seurat_doubletfinder_soupx_emptydrops_test
+Ostm1,1.1490794954023465e-5,1.7778378755817346,0.414,0.151,0.00918114516826474,2,seurat_doubletfinder_soupx_emptydrops_test
+Scnm1,1.3525553058989729e-5,1.0507200673718753,0.638,0.313,0.01080691689413279,2,seurat_doubletfinder_soupx_emptydrops_test
+Tom1l1,1.4771319079871316e-5,2.6258347821366845,0.207,0.034,0.01180228394481718,2,seurat_doubletfinder_soupx_emptydrops_test
+Eepd1,1.8309098346000614e-5,2.81847986007908,0.259,0.061,0.01462896957845449,2,seurat_doubletfinder_soupx_emptydrops_test
+Hnrnpa1,1.9504397814408905e-5,0.4909264233033932,0.983,0.994,0.01558401385371271,2,seurat_doubletfinder_soupx_emptydrops_test
+Selenow,1.9782925716428105e-5,-0.6155575340038824,1,0.983,0.01580655764742605,2,seurat_doubletfinder_soupx_emptydrops_test
+Ier3ip1,2.022267228027234e-5,0.9023524173341,0.81,0.497,0.0161579151519376,2,seurat_doubletfinder_soupx_emptydrops_test
+Ptgfrn,2.3783844031454583e-5,1.9602538212072431,0.31,0.089,0.01900329138113221,2,seurat_doubletfinder_soupx_emptydrops_test
+Iqgap3,2.4886323800596523e-5,4.326274500277776,0.121,0.006,0.01988417271667662,2,seurat_doubletfinder_soupx_emptydrops_test
+Fau,2.5899239369175073e-5,0.36104450974063385,1,0.994,0.02069349225597088,2,seurat_doubletfinder_soupx_emptydrops_test
+Kdm5b,3.0224593540729604e-5,-0.8078183953095064,0.621,0.844,0.02414945023904295,2,seurat_doubletfinder_soupx_emptydrops_test
+Rtkn,3.18223213193307e-5,3.2107972828578406,0.138,0.011,0.02542603473414523,2,seurat_doubletfinder_soupx_emptydrops_test
+Anxa5,3.693688877304142e-5,2.7132976233870236,0.207,0.039,0.02951257412966009,2,seurat_doubletfinder_soupx_emptydrops_test
+Rplp2,3.8179232172246294e-5,0.49101035858263087,1,0.978,0.03050520650562479,2,seurat_doubletfinder_soupx_emptydrops_test
+Tead1,3.8340947523909535e-5,0.9810224263880072,0.845,0.598,0.03063441707160372,2,seurat_doubletfinder_soupx_emptydrops_test
+Syn1,4.023859452570354e-5,-2.6068259746535904,0.052,0.324,0.03215063702603713,2,seurat_doubletfinder_soupx_emptydrops_test
+Dync2li1,4.642290871681552e-5,1.9059427013294197,0.362,0.134,0.0370919040647356,2,seurat_doubletfinder_soupx_emptydrops_test
+Idi1,4.907393621955776e-5,2.7038372941379576,0.414,0.201,0.03921007503942665,2,seurat_doubletfinder_soupx_emptydrops_test
+Lmo1,8.669022739816648e-17,2.5897946100699194,0.709,0.189,6.926549169113501e-14,0,seurat_doubletfinder_soupx_emptydrops_test
+Ctxn1,1.809978713208978e-16,1.2289272277327172,0.973,0.724,1.4461729918539736e-13,0,seurat_doubletfinder_soupx_emptydrops_test
+Sema3c,9.416792397769185e-16,2.5530998100892366,0.664,0.15,7.524017125817579e-13,0,seurat_doubletfinder_soupx_emptydrops_test
+Plxna4,3.5141955272224324e-15,1.816027195037933,0.882,0.583,2.8078422262507233e-12,0,seurat_doubletfinder_soupx_emptydrops_test
+Gad2,1.3327321271119557e-11,-4.594868243694319,0.045,0.417,1.0648529695624526e-8,0,seurat_doubletfinder_soupx_emptydrops_test
+Tmeff1,2.0774235880349923e-11,1.145573962156062,0.918,0.654,1.6598614468399593e-8,0,seurat_doubletfinder_soupx_emptydrops_test
+Myt1l,3.46405460564182e-11,0.9274083464076032,0.991,0.685,2.767779629907814e-8,0,seurat_doubletfinder_soupx_emptydrops_test
+Selenow,1.0005423920364426e-9,0.7176636404223591,1,0.976,7.994333712371176e-7,0,seurat_doubletfinder_soupx_emptydrops_test
+Adamts2,1.6609714854421453e-8,2.1548575533533705,0.355,0.055,1.327116216868274e-5,0,seurat_doubletfinder_soupx_emptydrops_test
+Slco1c1,1.1949485956462978e-6,-3.235618522601222,0.027,0.252,9.54763927921392e-4,0,seurat_doubletfinder_soupx_emptydrops_test
+Iqsec1,2.4271203933585857e-6,-2.9124142710265892,0.1,0.346,0.0019392691942935,0,seurat_doubletfinder_soupx_emptydrops_test
+Elk3,3.958099181085384e-6,-4.407384870867702,0.009,0.197,0.00316252124568722,0,seurat_doubletfinder_soupx_emptydrops_test
+Tango2,6.647070641678728e-6,1.2304085863605474,0.445,0.165,0.0053110094427013,0,seurat_doubletfinder_soupx_emptydrops_test
+Fabp3,7.685279666209807e-6,1.6434240880541795,0.327,0.087,0.00614053845330163,0,seurat_doubletfinder_soupx_emptydrops_test
+Abhd11,1.0635954704564793e-5,1.2531286628606308,0.473,0.205,0.00849812780894726,0,seurat_doubletfinder_soupx_emptydrops_test
+Klhl13,1.2142927894897004e-5,-2.240134003723715,0.045,0.252,0.0097021993880227,0,seurat_doubletfinder_soupx_emptydrops_test
+Ten1,1.6143206545164186e-5,0.933150009808512,0.573,0.268,0.01289842202958618,0,seurat_doubletfinder_soupx_emptydrops_test
+Fam114a2,2.2577326853730155e-5,1.1014563381406834,0.7,0.496,0.01803928415613039,0,seurat_doubletfinder_soupx_emptydrops_test
+Hsp90ab1,2.391828419520524e-5,0.3934121309976657,1,1,0.01911070907196898,0,seurat_doubletfinder_soupx_emptydrops_test
+Car11,2.8883741100963174e-5,2.354166361576777,0.218,0.039,0.02307810913966957,0,seurat_doubletfinder_soupx_emptydrops_test
+Calm2,3.495892999675939e-5,0.3545745367219215,1,0.976,0.02793218506741075,0,seurat_doubletfinder_soupx_emptydrops_test
+Ubxn2a,4.003090015146576e-5,1.1566989001775378,0.418,0.165,0.03198468922102114,0,seurat_doubletfinder_soupx_emptydrops_test
+Palmd,5.7034385791563155e-5,0.8277363099729523,0.509,0.236,0.04557047424745896,0,seurat_doubletfinder_soupx_emptydrops_test
+Mt2,5.994378773429488e-5,-4.650656021880066,0.009,0.157,0.04789508639970161,0,seurat_doubletfinder_soupx_emptydrops_test
diff --git a/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test.rds b/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test.rds
index 99c3a33..4ad1cbf 100644
Binary files a/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test_markergenes.csv
index 6b3cdcb..caae0b3 100644
--- a/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/emptydrops/filtered_seurat_emptydrops_test_markergenes.csv
@@ -1,195 +1,188 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
-Myt1l,5.601970901555697e-28,-3.502275092181775,0.424,0.986,4.5992181101772275e-25,3,filtered_seurat_emptydrops_test
-Slco1c1,9.296490505656148e-25,4.9651973062688715,0.559,0.029,7.632418705143698e-22,3,filtered_seurat_emptydrops_test
-Pax6,9.930887029883902e-20,3.666018336699984,0.627,0.096,8.153258251534684e-17,3,filtered_seurat_emptydrops_test
-Nde1,3.4844716338100195e-19,4.61321197752533,0.508,0.048,2.860751211358026e-16,3,filtered_seurat_emptydrops_test
-Rdm1,8.429656215632178e-19,4.602323661382594,0.441,0.024,6.920747753034019e-16,3,filtered_seurat_emptydrops_test
-Cenpn,2.1222104615817534e-17,6.912178923969381,0.322,0,1.7423347889586196e-14,3,filtered_seurat_emptydrops_test
-Elk3,4.154981486645186e-16,4.73160667832756,0.373,0.019,3.411239800535698e-13,3,filtered_seurat_emptydrops_test
-Ube2c,1.12310396628734e-15,5.472688380965998,0.475,0.062,9.220683563219061e-13,3,filtered_seurat_emptydrops_test
-Phactr1,1.4746891403429433e-15,-1.68913071850476,0.678,0.976,1.2107197842215565e-12,3,filtered_seurat_emptydrops_test
-Psrc1,3.589040206566245e-15,4.632071004776646,0.356,0.019,2.9466020095908873e-12,3,filtered_seurat_emptydrops_test
-Mt2,4.977983597146599e-15,4.456984298218555,0.339,0.014,4.086924533257358e-12,3,filtered_seurat_emptydrops_test
-Rpl13,1.2190520481564496e-14,0.6480582017618328,1,1,1.0008417315364452e-11,3,filtered_seurat_emptydrops_test
-Sgo2a,1.6823474503526234e-14,5.57960358488251,0.288,0.005,1.3812072567395038e-11,3,filtered_seurat_emptydrops_test
-Hes1,1.2880298732465212e-13,6.217033505497802,0.271,0.005,1.0574725259353939e-10,3,filtered_seurat_emptydrops_test
-Fnbp1l,3.0577080500878684e-13,-1.3436209218200783,0.746,0.981,2.51037830912214e-10,3,filtered_seurat_emptydrops_test
-Ctxn1,4.3677152231979344e-13,-1.4792901041710584,0.712,0.923,3.585894198245504e-10,3,filtered_seurat_emptydrops_test
-Dlgap5,1.3726799981732917e-12,4.912178923969381,0.271,0.01,1.1269702785002722e-9,3,filtered_seurat_emptydrops_test
-Fancd2,9.26418822746333e-12,4.699185200635182,0.254,0.01,7.605898534747394e-9,3,filtered_seurat_emptydrops_test
-Serf2,1.0202801450765022e-11,0.8595578319313422,0.983,0.971,8.376499991078083e-9,3,filtered_seurat_emptydrops_test
-Rpl26,3.177088941198413e-11,0.6053536664008665,1,1,2.6083900207238974e-8,3,filtered_seurat_emptydrops_test
-Cenpu,5.364694572152701e-11,3.8836097717726097,0.288,0.024,4.4044142437373674e-8,3,filtered_seurat_emptydrops_test
-Tpbg,5.3656697935844006e-11,3.9401933001389775,0.288,0.024,4.405214900532793e-8,3,filtered_seurat_emptydrops_test
-Plxna4,1.0467988484550339e-10,-2.2896509422329587,0.441,0.833,8.59421854581583e-8,3,filtered_seurat_emptydrops_test
-Ccnd1,1.0721864202504372e-10,3.8247160827190414,0.322,0.038,8.802650510256092e-8,3,filtered_seurat_emptydrops_test
-Ltbp1,1.2316952064844214e-10,2.0716308231895586,0.508,0.12,1.01122176452371e-7,3,filtered_seurat_emptydrops_test
-Mef2c,1.6724670608986388e-10,-3.3460798484453975,0.339,0.718,1.373095456997783e-7,3,filtered_seurat_emptydrops_test
-Gprc5b,1.8366503414566272e-10,2.6132119775253297,0.441,0.096,1.507889930335891e-7,3,filtered_seurat_emptydrops_test
-Gypc,2.031205319393875e-10,5.632071004776646,0.186,0,1.6676195672223717e-7,3,filtered_seurat_emptydrops_test
-Dpysl2,2.1211173425654292e-10,-0.972550021714979,0.864,0.981,1.7414373382462176e-7,3,filtered_seurat_emptydrops_test
-Snhg14,3.548254502616841e-10,-2.50855698576233,0.237,0.656,2.913116946648427e-7,3,filtered_seurat_emptydrops_test
-Nyap2,5.130173990972432e-10,-4.208706918818409,0.051,0.502,4.211872846588367e-7,3,filtered_seurat_emptydrops_test
-Rpsa,6.989425323632796e-10,0.7246736224619799,1,1,5.738318190702526e-7,3,filtered_seurat_emptydrops_test
-Cep170,7.834335980822289e-10,-1.4437727532068605,0.542,0.856,6.431989840255099e-7,3,filtered_seurat_emptydrops_test
-Tcf7l1,1.5312568032314859e-9,3.6320710047766456,0.271,0.029,1.25716183545305e-6,3,filtered_seurat_emptydrops_test
-Tmeff1,1.6525989639613475e-9,-1.3231826123932722,0.593,0.88,1.3567837494122665e-6,3,filtered_seurat_emptydrops_test
-Cdca5,2.625384977169017e-9,5.072643596162626,0.186,0.005,2.155441066255763e-6,3,filtered_seurat_emptydrops_test
-Ccnf,2.916720541795964e-9,4.778912393105917,0.22,0.014,2.3946275648144865e-6,3,filtered_seurat_emptydrops_test
-Metrn,3.0406605632273024e-9,4.48768109544147,0.186,0.005,2.496382322409616e-6,3,filtered_seurat_emptydrops_test
-Shisa2,4.5939830811098054e-9,3.239753581997885,0.22,0.014,3.77166010959115e-6,3,filtered_seurat_emptydrops_test
-Sept9,6.222806212182979e-9,1.8477996958320828,0.593,0.23,5.108923900202226e-6,3,filtered_seurat_emptydrops_test
-Hivep3,7.180579760125962e-9,-1.7806279180001352,0.288,0.732,5.895255983063415e-6,3,filtered_seurat_emptydrops_test
-Clic4,8.394656627143961e-9,1.4058870042778235,0.763,0.335,6.892013090885192e-6,3,filtered_seurat_emptydrops_test
-Usp22,9.7913324838517e-9,-1.0971248543554486,0.729,0.876,8.038683969242246e-6,3,filtered_seurat_emptydrops_test
-Nexmif,1.7380817201805672e-8,-2.5125872380552368,0.136,0.555,1.4269650922682456e-5,3,filtered_seurat_emptydrops_test
-Srebf1,2.1903734062755285e-8,2.561681676885248,0.373,0.086,1.798296566552209e-5,3,filtered_seurat_emptydrops_test
-Rpl19,3.966714455263517e-8,0.4962767805922419,1,1,3.2566725677713476e-5,3,filtered_seurat_emptydrops_test
-Jakmip2,4.690470969947134e-8,-1.804100707591542,0.356,0.694,3.850876666326597e-5,3,filtered_seurat_emptydrops_test
-Klhl13,4.824068062785276e-8,1.6463788414605292,0.39,0.096,3.960559879546712e-5,3,filtered_seurat_emptydrops_test
-Zfp704,9.083379772356881e-8,-1.2468371783059924,0.458,0.785,7.457454793105e-5,3,filtered_seurat_emptydrops_test
-Sash1,1.0073691973243445e-7,2.824716082719042,0.271,0.043,8.270501110032868e-5,3,filtered_seurat_emptydrops_test
-Ptgfrn,1.859846764553375e-7,2.372203878021535,0.356,0.091,1.526934193698321e-4,3,filtered_seurat_emptydrops_test
-Prkar2b,3.331857618479663e-7,-2.0761507252617073,0.22,0.569,2.735455104771803e-4,3,filtered_seurat_emptydrops_test
-C030005K06Rik,4.835725758371464e-7,5.912178923969381,0.119,0,3.970130847622972e-4,3,filtered_seurat_emptydrops_test
-Pdzd11,5.638536488980243e-7,1.264001128244563,0.712,0.378,4.62923845745278e-4,3,filtered_seurat_emptydrops_test
-Mrpl39,7.805690406869136e-7,1.387310770411743,0.576,0.244,6.40847182403956e-4,3,filtered_seurat_emptydrops_test
-Tead1,8.00441674983162e-7,1.1356451786571469,0.847,0.579,6.57162615161176e-4,3,filtered_seurat_emptydrops_test
-Iqgap3,8.587694323872479e-7,4.632071004776646,0.136,0.005,7.050497039899305e-4,3,filtered_seurat_emptydrops_test
-Idi1,1.040789178854218e-6,2.7452816152246364,0.475,0.211,8.54487915839313e-4,3,filtered_seurat_emptydrops_test
-Ostm1,1.1233192144336168e-6,2.03770980605324,0.441,0.163,9.222450750499994e-4,3,filtered_seurat_emptydrops_test
-Rab28,1.276141428306448e-6,1.1917735530960636,0.661,0.33,0.00104771211263959,3,filtered_seurat_emptydrops_test
-Nsl1,1.3567576922038162e-6,2.9622196064689765,0.153,0.01,0.00111389806529933,3,filtered_seurat_emptydrops_test
-Cdh13,2.3579411356269375e-6,-3.801273686262169,0.119,0.435,0.00193586967234971,3,filtered_seurat_emptydrops_test
-Gins2,2.7811031835325005e-6,3.327216423248225,0.186,0.024,0.00228328571368018,3,filtered_seurat_emptydrops_test
-Mastl,3.2612295249706372e-6,2.912178923969381,0.186,0.024,0.00267746944000089,3,filtered_seurat_emptydrops_test
-Tgfbr2,3.3206856595083972e-6,5.409678583440197,0.102,0,0.00272628292645639,3,filtered_seurat_emptydrops_test
-Selenow,3.4048421598740573e-6,-0.6169699857283018,1,0.99,0.0027953754132566,3,filtered_seurat_emptydrops_test
-Gabbr1,6.420123295267279e-6,-1.278713506936364,0.475,0.708,0.00527092122541443,3,filtered_seurat_emptydrops_test
-Rtkn,6.8612331696501156e-6,3.409678583440198,0.136,0.01,0.00563307243228274,3,filtered_seurat_emptydrops_test
-Fadd,7.34637178161386e-6,2.2721750596902623,0.237,0.048,0.00603137123270497,3,filtered_seurat_emptydrops_test
-Kdm5b,8.57061310345084e-6,-0.8133577544616772,0.627,0.866,0.00703647335793314,3,filtered_seurat_emptydrops_test
-Rpl17,8.749672271437975e-6,0.45617704554008887,1,0.995,0.00718348093485057,3,filtered_seurat_emptydrops_test
-Wdr76,9.520578136786658e-6,1.9357473951077857,0.322,0.096,0.00781639465030184,3,filtered_seurat_emptydrops_test
-Anxa5,1.007263916995277e-5,2.6132119775253293,0.22,0.043,0.00826963675853122,3,filtered_seurat_emptydrops_test
-Scnm1,1.066845389195628e-5,0.9735794686335244,0.661,0.325,0.0087588006452961,3,filtered_seurat_emptydrops_test
-Hnrnpa1,1.1277806991157184e-5,0.4730045188090273,1,0.995,0.00925907953974004,3,filtered_seurat_emptydrops_test
-Rplp2,1.9128026874393397e-5,0.4517743192618946,1,0.995,0.01570411006387698,3,filtered_seurat_emptydrops_test
-Eepd1,1.9595029462829577e-5,2.746713570717769,0.271,0.077,0.01608751918898308,3,filtered_seurat_emptydrops_test
-Rabl3,2.2444827237460367e-5,2.1295706642474626,0.254,0.062,0.01842720316195496,3,filtered_seurat_emptydrops_test
-Gsx2,2.272817470992686e-5,4.632071004776646,0.085,0,0.01865983143684995,3,filtered_seurat_emptydrops_test
-Rhcg,2.273547189839973e-5,5.146644177606404,0.085,0,0.01866582242858617,3,filtered_seurat_emptydrops_test
-Syn1,2.314692432043162e-5,-2.485139179867746,0.068,0.349,0.01900362486707436,3,filtered_seurat_emptydrops_test
-Rusc1,2.3715013510233164e-5,-2.6215401471705224,0.068,0.344,0.01947002609190143,3,filtered_seurat_emptydrops_test
-Hnrnpd,2.4404286274001383e-5,0.5977363918869418,0.983,0.967,0.02003591903095513,3,filtered_seurat_emptydrops_test
-Abr,2.911197615362227e-5,-1.486870067946862,0.356,0.603,0.02390093242212388,3,filtered_seurat_emptydrops_test
-Slain1,3.1609100328870186e-5,-1.297274441659569,0.39,0.646,0.02595107137000242,3,filtered_seurat_emptydrops_test
-Fau,3.376712009833793e-5,0.32808036425307696,1,1,0.02772280560073544,3,filtered_seurat_emptydrops_test
-Mybl2,3.401700443852235e-5,3.203227705972772,0.136,0.014,0.02792796064402684,3,filtered_seurat_emptydrops_test
-Marc2,3.536856469129454e-5,1.2492139112469518,0.525,0.254,0.02903759161155282,3,filtered_seurat_emptydrops_test
-Prmt2,3.642658786000537e-5,-1.1294802276678335,0.441,0.67,0.02990622863306441,3,filtered_seurat_emptydrops_test
-Mamld1,3.699498658139578e-5,1.6872125589691067,0.271,0.072,0.03037288398332593,3,filtered_seurat_emptydrops_test
-Calm2,3.7730332084545734e-5,-0.42083089638591176,0.949,1,0.03097660264141204,3,filtered_seurat_emptydrops_test
-Dync2li1,4.496992157396571e-5,1.9096049803055544,0.356,0.139,0.03692030561222585,3,filtered_seurat_emptydrops_test
-Gm49980,6.08411384169344e-5,1.502787987831679,0.373,0.148,0.04995057464030315,3,filtered_seurat_emptydrops_test
-Fbn2,1.3940555128061331e-14,1.87810036836301,0.75,0.265,1.1445195760138353e-11,1,filtered_seurat_emptydrops_test
-Mef2c,5.4169966883609793e-14,1.898226841606314,0.891,0.554,4.447354281144363e-11,1,filtered_seurat_emptydrops_test
-Fabp3,7.68159406030712e-14,2.152418283091109,0.594,0.127,6.306588723512144e-11,1,filtered_seurat_emptydrops_test
-Dok5,1.940267421555353e-12,2.0778767924211414,0.75,0.358,1.5929595530969447e-9,1,filtered_seurat_emptydrops_test
-Ctxn1,2.72615242892376e-10,0.918841676354872,0.938,0.858,2.238171144146407e-7,1,filtered_seurat_emptydrops_test
-Tes,2.758167825521e-9,2.797956224055354,0.297,0.039,2.2644557847527414e-6,1,filtered_seurat_emptydrops_test
-Cdh13,4.648352586202264e-9,1.3316511861881315,0.672,0.27,3.816297473272058e-6,1,filtered_seurat_emptydrops_test
-Dpysl2,1.511259462901837e-8,0.6189860830100353,1,0.941,1.2407440190424084e-5,1,filtered_seurat_emptydrops_test
-Slc6a15,1.6835126906229322e-8,1.6724253419714954,0.484,0.147,1.3821639190014274e-5,1,filtered_seurat_emptydrops_test
-Plxna4,2.807135376647552e-7,1.144990018204688,0.812,0.725,2.30465814422764e-4,1,filtered_seurat_emptydrops_test
-Abr,3.636793038692439e-7,0.9404865648801222,0.844,0.456,2.985807084766492e-4,1,filtered_seurat_emptydrops_test
-St3gal1,4.3172664415409236e-7,2.2738759654812206,0.328,0.078,3.5444757485050983e-4,1,filtered_seurat_emptydrops_test
-Selenow,5.155394387201481e-7,0.5801212376516567,1,0.99,4.232578791892416e-4,1,filtered_seurat_emptydrops_test
-Car11,6.634208876228633e-7,2.1671900337210737,0.344,0.093,5.446685487383707e-4,1,filtered_seurat_emptydrops_test
-Prkar2b,9.741086895822015e-7,1.016379743188857,0.766,0.407,7.997432341469875e-4,1,filtered_seurat_emptydrops_test
-Nexmif,1.2232965976873857e-6,1.0305604500158625,0.734,0.377,0.00100432650670134,1,filtered_seurat_emptydrops_test
-Tcf4,1.5577497566487228e-6,-0.5368125834956423,1,1,0.0012789125502086,1,filtered_seurat_emptydrops_test
-Bcat1,1.6002596460500142e-6,1.0654365349203403,0.672,0.338,0.00131381316940706,1,filtered_seurat_emptydrops_test
-Prmt2,2.3506023531918377e-6,0.8542636649573087,0.844,0.549,0.00192984453197049,1,filtered_seurat_emptydrops_test
-Noct,2.400296310534457e-6,1.4441563542983782,0.438,0.152,0.00197064327094878,1,filtered_seurat_emptydrops_test
-Paqr9,3.269022637359378e-6,2.7879025593914313,0.188,0.025,0.00268386758527204,1,filtered_seurat_emptydrops_test
-Myt1l,3.397378667261643e-6,0.5658804238184625,1,0.819,0.0027892478858218,1,filtered_seurat_emptydrops_test
-Arhgap28,3.585108870299838e-6,2.034995421356204,0.391,0.132,0.00294337438251616,1,filtered_seurat_emptydrops_test
-Ltbp1,4.0072441445380095e-6,-5.676302812259582,0,0.27,0.0032899474426657,1,filtered_seurat_emptydrops_test
-Phactr1,4.0414729068694615e-6,0.7489234794455388,1,0.882,0.00331804925653982,1,filtered_seurat_emptydrops_test
-Insm1,4.600372553306131e-6,-2.00939869800225,0.391,0.623,0.00377690586626433,1,filtered_seurat_emptydrops_test
-Necap1,4.608511199142449e-6,1.2046463806206786,0.547,0.24,0.00378358769449595,1,filtered_seurat_emptydrops_test
-Grrp1,6.780459050596994e-6,2.672425341971495,0.203,0.034,0.00556675688054013,1,filtered_seurat_emptydrops_test
-Gad2,7.265485083368645e-6,-4.304854581528421,0.031,0.304,0.00596496325344565,1,filtered_seurat_emptydrops_test
-Syn1,8.641330214512209e-6,1.1830405012325709,0.516,0.216,0.00709453210611452,1,filtered_seurat_emptydrops_test
-Tead1,1.1569464314952337e-5,-1.2682988487128983,0.453,0.696,0.00949853020257586,1,filtered_seurat_emptydrops_test
-Csmd2,1.2167709454909996e-5,1.231529674771626,0.734,0.505,0.0099896894624811,1,filtered_seurat_emptydrops_test
-Trmt9b,1.2391429455801149e-5,2.539158811108031,0.219,0.044,0.01017336358321274,1,filtered_seurat_emptydrops_test
-Klf8,1.4943355750663902e-5,1.119884318942717,0.438,0.172,0.01226849507129506,1,filtered_seurat_emptydrops_test
-Mrpl57,1.7786691464943092e-5,0.8977176538137384,0.75,0.471,0.01460287369271828,1,filtered_seurat_emptydrops_test
-Slc6a6,1.962064179842518e-5,0.7858071413892382,0.766,0.441,0.01610854691650707,1,filtered_seurat_emptydrops_test
-Prxl2a,3.512649455559695e-5,0.8188148289530188,0.641,0.328,0.02883885203014509,1,filtered_seurat_emptydrops_test
-Fam174b,4.019019855263487e-5,1.3870231231092474,0.375,0.137,0.03299615301171323,1,filtered_seurat_emptydrops_test
-Pax6,4.824329153403583e-5,-3.658491536143121,0.031,0.27,0.03960774234944341,1,filtered_seurat_emptydrops_test
-Gad2,1.9762059572291623e-26,4.498873524007447,0.71,0.097,1.622465090885142e-23,2,filtered_seurat_emptydrops_test
-Cntnap5c,2.8329859667789363e-16,4.007582218384885,0.468,0.053,2.3258814787255065e-13,2,filtered_seurat_emptydrops_test
-Tox2,8.618629610484369e-13,4.732304216796343,0.306,0.019,7.075894910207666e-10,2,filtered_seurat_emptydrops_test
-Hsp90ab1,2.7925385439001184e-11,-0.7900400352459225,1,1,2.2926741445419972e-8,2,filtered_seurat_emptydrops_test
-Rpl13,4.4426766969964384e-11,-0.6248876828617984,1,1,3.647437568234076e-8,2,filtered_seurat_emptydrops_test
-Mmd2,1.8049324546768678e-10,-3.4490255479182186,0.048,0.524,1.481849545289709e-7,2,filtered_seurat_emptydrops_test
-Rpl19,7.799820975224694e-9,-0.5765210120920514,1,1,6.403653020659474e-6,2,filtered_seurat_emptydrops_test
-Sema3c,7.833397828354392e-9,-3.9115519729783816,0.065,0.471,6.431219617078956e-6,2,filtered_seurat_emptydrops_test
-Mef2c,9.323558794468178e-9,0.993079115448012,0.935,0.544,7.654641770258374e-6,2,filtered_seurat_emptydrops_test
-Lmo1,9.659312604454741e-9,-2.4123540260355396,0.113,0.534,7.930295648257343e-6,2,filtered_seurat_emptydrops_test
-Zfp704,1.4605771586827791e-8,1.4138849076861195,0.887,0.66,1.1991338472785614e-5,2,filtered_seurat_emptydrops_test
-Rplp2,5.204557248828902e-8,-0.6412350404883114,1,0.995,4.272941501288529e-5,2,filtered_seurat_emptydrops_test
-Rpl26,5.3810358115965837e-8,-0.5300310395006811,1,1,4.417830401320795e-5,2,filtered_seurat_emptydrops_test
-Palmd,6.52180343835525e-8,-2.799077243719969,0.065,0.451,5.354400622889661e-5,2,filtered_seurat_emptydrops_test
-Insm1,7.4258235562964e-8,-2.131881927857937,0.306,0.646,6.096601139719345e-5,2,filtered_seurat_emptydrops_test
-Zfhx4,8.62556600536832e-8,-3.131193783298795,0.065,0.447,7.08158969040739e-5,2,filtered_seurat_emptydrops_test
-Serf2,1.4443730084384065e-7,-0.7302616525650865,0.968,0.976,1.1858302399279316e-4,2,filtered_seurat_emptydrops_test
-Eef1g,2.8535162749971e-7,-0.7095845021319318,0.952,0.985,2.342736861772619e-4,2,filtered_seurat_emptydrops_test
-Dok5,6.83548298439948e-7,-2.170207938301601,0.177,0.534,5.611931530191973e-4,2,filtered_seurat_emptydrops_test
-Mrpl57,8.377717705444549e-7,-1.4023453098984386,0.242,0.626,6.878106236169975e-4,2,filtered_seurat_emptydrops_test
-Gtf2a2,9.432851001325427e-7,-0.8120162994274671,0.677,0.883,7.744370672088177e-4,2,filtered_seurat_emptydrops_test
-Sst,1.0943892305754178e-6,7.732304216796344,0.113,0,8.984935583024181e-4,2,filtered_seurat_emptydrops_test
-Rpl5,1.377187951095896e-6,-0.6328414772381723,0.952,0.976,0.00113067130784973,2,filtered_seurat_emptydrops_test
-Hivep3,1.8083951738977595e-6,1.0689759420700082,0.823,0.578,0.00148469243777006,2,filtered_seurat_emptydrops_test
-Idi1,2.3377131001237923e-6,-3.57147653138076,0.032,0.34,0.00191926245520163,2,filtered_seurat_emptydrops_test
-Snhg14,2.4243596858532254e-6,1.2394915627053955,0.742,0.51,0.00199039930208549,2,filtered_seurat_emptydrops_test
-Reln,4.144707286061148e-6,4.415114040915644,0.242,0.053,0.0034028046818562,2,filtered_seurat_emptydrops_test
-Snu13,4.795783836697814e-6,-0.8256912363245438,0.758,0.903,0.0039373385299289,2,filtered_seurat_emptydrops_test
-Rpl17,5.618060604510529e-6,-0.5106910011050116,1,0.995,0.00461242775630314,2,filtered_seurat_emptydrops_test
-Spats2l,8.218952269822665e-6,2.19173583543364,0.355,0.121,0.0067477598135244,2,filtered_seurat_emptydrops_test
-Hnrnpa1,1.0926427403393622e-5,-0.5452297587325656,1,0.995,0.00897059689818616,2,filtered_seurat_emptydrops_test
-Gm4258,1.0991812916240775e-5,1.091275653654428,0.887,0.762,0.00902427840423367,2,filtered_seurat_emptydrops_test
-Iqsec1,1.2077863069941114e-5,2.6391948124048614,0.403,0.175,0.00991592558042165,2,filtered_seurat_emptydrops_test
-Snrpb2,1.6756163131570257e-5,-0.9044972154444312,0.435,0.752,0.01375680993101918,2,filtered_seurat_emptydrops_test
-Drg2,1.878983579335621e-5,-1.4620738283705084,0.145,0.461,0.01542645518634544,2,filtered_seurat_emptydrops_test
-Scnm1,1.997033023639296e-5,-1.360805187595138,0.161,0.471,0.01639564112407862,2,filtered_seurat_emptydrops_test
-Nhp2,2.6165581011760565e-5,-1.260464213972581,0.274,0.583,0.02148194201065542,2,filtered_seurat_emptydrops_test
-Vps36,2.6652809898069472e-5,-1.3969788001486234,0.161,0.481,0.02188195692631503,2,filtered_seurat_emptydrops_test
-Fam216a,2.755348194413063e-5,-1.2887573987314866,0.161,0.485,0.02262140867613124,2,filtered_seurat_emptydrops_test
-2810013P06Rik,3.090142328437515e-5,-1.9115519729783816,0.097,0.379,0.02537006851647199,2,filtered_seurat_emptydrops_test
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+Abr,9.51080301110574e-7,0.780578762704351,0.862,0.455,7.808369272117811e-4,1,filtered_seurat_emptydrops_test
+Arhgap28,1.6227095164569249e-6,1.9984137491080485,0.4,0.129,0.00133224451301113,1,filtered_seurat_emptydrops_test
+Baz2b,1.961718066609514e-6,-1.125905025372754,0.677,0.876,0.00161057053268641,1,filtered_seurat_emptydrops_test
+Plxna4,2.2623106929248204e-6,1.0346444587710115,0.815,0.723,0.00185735707889127,1,filtered_seurat_emptydrops_test
+Ltbp1,2.9863071881957607e-6,-5.7217083348947435,0,0.272,0.00245175820150871,1,filtered_seurat_emptydrops_test
+Noct,4.344303928153453e-6,1.4075746820502228,0.431,0.153,0.00356667352501398,1,filtered_seurat_emptydrops_test
+Prxl2a,6.869757037230109e-6,0.8988780755571342,0.662,0.322,0.00564007052756591,1,filtered_seurat_emptydrops_test
+Slc6a6,6.983989897523269e-6,0.8261748818274897,0.769,0.441,0.0057338557058666,1,filtered_seurat_emptydrops_test
+Dpysl2,1.010744962142129e-5,0.49930483677557413,1,0.941,0.00829821613918688,1,filtered_seurat_emptydrops_test
+Hsp90ab1,1.196787905891138e-5,0.4217346876458343,1,1,0.00982562870736624,1,filtered_seurat_emptydrops_test
+Nexmif,1.999349679701424e-5,0.8703089233603631,0.708,0.386,0.01641466087034869,1,filtered_seurat_emptydrops_test
+Bok,2.207364133334312e-5,0.8248774941133572,0.6,0.282,0.0181224595346747,1,filtered_seurat_emptydrops_test
+Mrpl57,2.462598360660334e-5,0.8886097401033072,0.738,0.475,0.02021793254102134,1,filtered_seurat_emptydrops_test
+Gad2,3.126840790265231e-5,-3.4516191715269993,0.046,0.297,0.02567136288807754,1,filtered_seurat_emptydrops_test
+Prmt2,3.407266961428063e-5,0.7377232837425538,0.831,0.554,0.0279736617533244,1,filtered_seurat_emptydrops_test
+Csmd2,3.642247118554996e-5,0.9965154658856352,0.754,0.495,0.02990284884333651,1,filtered_seurat_emptydrops_test
+Tead1,4.16382067414523e-5,-1.1942313288343476,0.477,0.688,0.03418496773473234,1,filtered_seurat_emptydrops_test
+Syn1,4.345060555937379e-5,1.1268300222354828,0.492,0.223,0.03567294716424588,1,filtered_seurat_emptydrops_test
+Prr16,4.3584839150305187e-5,1.6947373587769088,0.2,0.04,0.03578315294240056,1,filtered_seurat_emptydrops_test
+Rpl19,5.0875249327637864e-5,0.28989536601209354,1,1,0.04176857969799068,1,filtered_seurat_emptydrops_test
+Kctd2,5.511572837791178e-5,0.940698251251761,0.554,0.262,0.04525001299826557,1,filtered_seurat_emptydrops_test
+Gad2,9.093670469180163e-24,4.310246289839727,0.677,0.102,7.465903455196915e-21,2,filtered_seurat_emptydrops_test
+Cntnap5c,6.88943253278413e-18,4.828377282082674,0.484,0.049,5.6562241094157715e-15,2,filtered_seurat_emptydrops_test
+Rpl13,1.3247796132117682e-13,-0.7212064524568662,1,1,1.0876440624468613e-10,2,filtered_seurat_emptydrops_test
+Tox2,9.830780528931031e-13,4.725283789118571,0.306,0.02,8.071070814252376e-10,2,filtered_seurat_emptydrops_test
+Hsp90ab1,4.2371685538822874e-11,-0.7899391000206997,1,1,3.478715382737358e-8,2,filtered_seurat_emptydrops_test
+Rpl26,9.153960564974079e-11,-0.6685980961748448,1,1,7.515401623843718e-8,2,filtered_seurat_emptydrops_test
+Mmd2,1.1118351109490709e-10,-3.461714725682683,0.048,0.532,9.128166260891873e-8,2,filtered_seurat_emptydrops_test
+Rpl19,2.67603759978024e-10,-0.6409145726963077,1,1,2.1970268694195775e-7,2,filtered_seurat_emptydrops_test
+Mef2c,9.064975086359005e-10,1.2494141456192964,0.919,0.551,7.442344545900743e-7,2,filtered_seurat_emptydrops_test
+Rplp2,1.326613694091541e-9,-0.7275531431574773,1,0.995,1.0891498428491554e-6,2,filtered_seurat_emptydrops_test
+Sema3c,1.4628424028801356e-9,-4.347965192912067,0.048,0.478,1.2009936127645916e-6,2,filtered_seurat_emptydrops_test
+Lmo1,2.648856488672127e-9,-3.1376634589023507,0.113,0.537,2.174711177199816e-6,2,filtered_seurat_emptydrops_test
+Zfp704,7.200448688333364e-9,1.3660995245732446,0.887,0.663,5.911568373121692e-6,2,filtered_seurat_emptydrops_test
+Hivep3,2.3729763108103833e-8,1.195773734745133,0.855,0.566,1.9482135511753248e-5,2,filtered_seurat_emptydrops_test
+Snhg14,7.608256169780861e-8,1.3563159385357118,0.774,0.498,6.246378315390088e-5,2,filtered_seurat_emptydrops_test
+Zfhx4,7.657172778344636e-8,-3.138214210976567,0.065,0.449,6.286538851020947e-5,2,filtered_seurat_emptydrops_test
+Palmd,9.002656827006814e-8,-2.6283531654961294,0.065,0.454,7.391181254972594e-5,2,filtered_seurat_emptydrops_test
+Insm1,1.1253015395332223e-7,-2.0976008312326377,0.323,0.649,9.238725639567754e-5,2,filtered_seurat_emptydrops_test
+Rpl5,1.2632826955889956e-7,-0.720403923000458,0.935,0.98,1.0371550930785651e-4,2,filtered_seurat_emptydrops_test
+Serf2,2.167246330650439e-7,-0.7303956946576187,0.952,0.98,1.7793092374640104e-4,2,filtered_seurat_emptydrops_test
+Rpl17,3.1623703854805036e-7,-0.5802963116813076,1,0.995,2.596306086479493e-4,2,filtered_seurat_emptydrops_test
+Hnrnpa1,9.56741954310096e-7,-0.6064049651864334,1,0.995,7.854851444885889e-4,2,filtered_seurat_emptydrops_test
+Sst,1.1608544296942525e-6,7.7252837891185715,0.113,0,9.530614867789812e-4,2,filtered_seurat_emptydrops_test
+Mrpl57,2.0406982688758014e-6,-1.3408054013392017,0.258,0.624,0.00167541327874703,2,filtered_seurat_emptydrops_test
+Idi1,2.1540362385626514e-6,-3.5784969590585325,0.032,0.341,0.00176846375185993,2,filtered_seurat_emptydrops_test
+Gtf2a2,2.7635856145113616e-6,-0.7729670784092548,0.694,0.878,0.00226890378951382,2,filtered_seurat_emptydrops_test
+Iqsec1,3.103785382923203e-6,2.6942568934979465,0.419,0.171,0.00254820779937994,2,filtered_seurat_emptydrops_test
+Reln,4.4606876042346695e-6,4.408093613237871,0.242,0.054,0.00366222452307666,2,filtered_seurat_emptydrops_test
+Rpsa,5.16311745860214e-6,-0.5948307353968603,1,1,0.00423891943351235,2,filtered_seurat_emptydrops_test
+Rian,5.656917248765338e-6,1.806420551843976,0.532,0.263,0.00464432906123634,2,filtered_seurat_emptydrops_test
+Eef1g,5.879863488533359e-6,-0.6232025172516669,0.952,0.985,0.00482736792408588,2,filtered_seurat_emptydrops_test
+Spats2l,8.967362135539633e-6,2.184715407755868,0.355,0.122,0.00736220431327803,2,filtered_seurat_emptydrops_test
+Pex13,1.0619642422195916e-5,-1.4446412123237415,0.145,0.478,0.00871872642862284,2,filtered_seurat_emptydrops_test
+Scnm1,1.7814237984149747e-5,-1.367825615272911,0.161,0.473,0.01462548938498694,2,filtered_seurat_emptydrops_test
+Nhp2,2.2055490065072068e-5,-1.2747162108814292,0.274,0.585,0.01810755734342416,2,filtered_seurat_emptydrops_test
+Dok5,2.6641232909168732e-5,-1.5966443057687916,0.226,0.522,0.02187245221842753,2,filtered_seurat_emptydrops_test
+Fau,2.693797720784633e-5,-0.4018281287847687,1,1,0.02211607928764183,2,filtered_seurat_emptydrops_test
+2810013P06Rik,2.7678194334570495e-5,-1.932927693633224,0.097,0.38,0.02272379754868237,2,filtered_seurat_emptydrops_test
+Snu13,2.787433881829251e-5,-0.756300971757277,0.758,0.902,0.02288483216981815,2,filtered_seurat_emptydrops_test
+BC043934,4.264206635856873e-5,4.310246289839728,0.081,0,0.03500913648038492,2,filtered_seurat_emptydrops_test
+Drg2,5.340694544737472e-5,-1.3500043381856663,0.161,0.459,0.04384710221229464,2,filtered_seurat_emptydrops_test
+Sema3c,1.7012337184084782e-26,3.181377096452592,0.825,0.187,1.396712882813361e-23,0,filtered_seurat_emptydrops_test
+Mef2c,4.6514054006000206e-10,-2.4618757497400954,0.412,0.733,3.818803833892618e-7,0,filtered_seurat_emptydrops_test
+Lmo1,8.173341855100702e-9,1.7186136989754848,0.662,0.342,6.710313663037676e-6,0,filtered_seurat_emptydrops_test
+Fam114a2,1.7812031460160572e-8,1.3011380454856782,0.812,0.519,1.462367782879183e-5,0,filtered_seurat_emptydrops_test
+Insm1,3.399485153322188e-8,0.9471132444549356,0.787,0.481,2.790977310877517e-5,0,filtered_seurat_emptydrops_test
+E330009J07Rik,4.5248452745627256e-8,1.507366095700999,0.613,0.299,3.714897970415998e-5,0,filtered_seurat_emptydrops_test
+Myt1l,2.3243195011703314e-7,0.776041716304396,0.963,0.818,1.908266310460842e-4,0,filtered_seurat_emptydrops_test
+Tcf4,3.639855896886587e-7,0.4172634617931292,1,1,2.988321691343888e-4,0,filtered_seurat_emptydrops_test
+Zfhx4,3.884995432556236e-7,1.7524785935375309,0.575,0.267,3.1895812501286697e-4,0,filtered_seurat_emptydrops_test
+Palmd,5.298396662005238e-7,1.2698206007845347,0.588,0.267,4.3499836595063007e-4,0,filtered_seurat_emptydrops_test
+Adamts2,9.338896350309044e-7,2.3846230309887595,0.362,0.118,7.667233903603726e-4,0,filtered_seurat_emptydrops_test
+Gad2,4.52480584157227e-6,-4.234465253637023,0.062,0.31,0.00371486559593083,0,filtered_seurat_emptydrops_test
+Plxna4,1.0688952338722917e-5,0.8000360609629986,0.887,0.684,0.00877562987009151,0,filtered_seurat_emptydrops_test
+Pappa2,1.1396572936311093e-5,3.2953556928916727,0.138,0.011,0.0093565863807114,0,filtered_seurat_emptydrops_test
+Tmeff1,1.2056733688006809e-5,0.7189998995211495,0.925,0.77,0.00989857835785358,0,filtered_seurat_emptydrops_test
+Atp1b1,3.69522018066161e-5,-1.991351541926489,0.175,0.422,0.03033775768323181,0,filtered_seurat_emptydrops_test
+Baz2b,5.527786683475694e-5,0.7433145815214139,0.912,0.791,0.04538312867133545,0,filtered_seurat_emptydrops_test
diff --git a/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/barcodes.tsv.gz b/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/barcodes.tsv.gz
index e44208e..74a2f09 100644
Binary files a/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/barcodes.tsv.gz and b/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/barcodes.tsv.gz differ
diff --git a/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/matrix.mtx.gz b/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/matrix.mtx.gz
index 1a13cf3..52ab4b9 100644
Binary files a/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/matrix.mtx.gz and b/tests/reference_outputs/testdata/results/emptydrops/test_emptydrops_filtered_matrix/matrix.mtx.gz differ
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test.rds
index c115c13..b1d78ed 100644
Binary files a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test_markergenes.csv
index 1b4e55a..7df8f31 100644
--- a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,150 +1,160 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
-Ctxn1,1.0838460314578057e-12,1.0923668953473564,0.978,0.844,8.573222108831242e-10,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mef2c,1.3831734239458617e-10,1.6134747516264354,0.935,0.542,1.0940901783411767e-7,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fabp3,1.8474676509028544e-10,1.9052813427468616,0.587,0.135,1.4613469118641577e-7,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Dok5,4.6272597750496984e-10,2.0207585601667977,0.739,0.344,3.660162482064312e-7,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fbn2,1.4331344899778255e-9,1.874522409940634,0.696,0.271,1.13360938157246e-6,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Plxna4,9.393770255332706e-9,1.2260970313046449,0.913,0.734,7.430472271968171e-6,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Selenow,1.0844273581892344e-8,0.693376035187327,1,0.984,8.577820403276846e-6,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Car11,1.529423508373302e-7,2.3129393116601076,0.391,0.089,1.2097739951232816e-4,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Bcat1,2.2309085880803577e-7,1.2166787701420545,0.739,0.318,1.764648693171563e-4,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Noct,3.10313483347835e-7,1.7494565383494032,0.5,0.151,2.4545796532813744e-4,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tes,1.3846460928583823e-6,2.7394724497767804,0.261,0.042,0.00109525505945098,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Crlf1,2.0790453387026264e-6,2.448423667773391,0.283,0.052,0.00164452486291377,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mettl22,4.371331239547648e-6,1.5208321633014406,0.457,0.146,0.00345772301048218,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tcf4,4.475383997833561e-6,-0.5712967534831686,1,1,0.00354002874228634,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Slc6a6,4.831744796319411e-6,0.9963055164422584,0.804,0.432,0.00382191013388865,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Grcc10,8.509090610231389e-6,0.6811738092121138,1,0.87,0.00673069067269302,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hsp90ab1,1.072587265187496e-5,0.4928324821936556,1,1,0.00848416526763309,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Abr,1.3412403001311245e-5,0.8834827524683001,0.826,0.453,0.01060921077403719,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cdh13,1.651750878456272e-5,0.8094821710245234,0.63,0.271,0.01306534944858911,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Prkar2b,2.0486378850207373e-5,0.9358696625802844,0.761,0.401,0.01620472567051403,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Prr16,2.5363759622432943e-5,2.131789872555541,0.217,0.036,0.02006273386134446,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Arhgap28,3.655868275377133e-5,1.67145402634813,0.391,0.125,0.02891791805823312,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Grrp1,4.9572765143327257e-05,2.476438043942987,0.217,0.042,0.03921205722837186,3,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gad2,2.3150761489380195e-22,4.4693334765939845,0.652,0.081,1.8312252338099736e-19,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cntnap5c,1.5138021455370502e-14,4.873723731673319,0.439,0.047,1.197417497119807e-11,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sema3c,7.804117025311466e-11,-4.7638068198519905,0.045,0.506,6.173056567021369e-8,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl13,8.070063562258633e-11,-0.6254510161029883,1,1,6.383420277746579e-8,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hsp90ab1,8.160521793201586e-11,-0.7692934379900063,1,1,6.454972738422454e-8,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tox2,3.9090930302958744e-10,4.469333476593984,0.273,0.017,3.092092586964037e-7,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mef2c,4.792384045298395e-10,1.344344624068155,0.879,0.517,3.79077577983103e-7,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Snhg14,8.101605274261938e-10,1.5953849053336395,0.788,0.459,6.408369771941194e-7,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Serf2,2.332603531400579e-9,-0.8783284697920117,0.939,0.971,1.845089393337858e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Insm1,2.402032659480136e-9,-2.3658747975758043,0.303,0.663,1.9000078336487876e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl26,2.929433967113136e-9,-0.595242935311938,1,0.994,2.3171822679864903e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Lmo1,3.6437731198312406e-9,-2.636051272653618,0.121,0.541,2.8822245377865113e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mmd2,3.7107711977883452e-9,-2.7660280597686686,0.106,0.535,2.9352200174505812e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Zfhx4,6.5549528901153725e-9,-3.2683833256292307,0.061,0.477,5.1849677360812594e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Zfp704,6.728038664860757e-9,1.4134407143445145,0.894,0.61,5.321878583904859e-6,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hnrnpa1,1.6455642345719012e-8,-0.6968329190015208,1,0.994,1.3016413095463735e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rplp2,3.110713437462099e-8,-0.6616983795937545,0.985,0.994,2.460574329032521e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl19,4.8032521075132954e-8,-0.5646628484335858,1,1,3.799372417043016e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl5,6.106287101629173e-8,-0.7890750205741273,0.879,0.965,4.830073097388675e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rian,8.805030789412549e-8,2.186474946385214,0.53,0.221,6.964779354425325e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hivep3,9.982422570831173e-8,1.258387581908644,0.848,0.564,7.896096253527456e-5,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cdh11,2.1276803902735818e-7,2.703798730231007,0.485,0.192,1.682995188706403e-4,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Eef1g,2.143142147945272e-7,-0.7235965156149149,0.939,0.983,1.6952254390247102e-4,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Palmd,2.895821420015289e-7,-2.1053951914903783,0.106,0.477,2.290594743232093e-4,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gtf2a2,5.282741467793952e-7,-0.8379105725362652,0.667,0.878,4.178648501025016e-4,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gm4258,7.784300803550066e-7,1.1587749748799947,0.894,0.727,6.157381935608103e-4,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Iqsec1,1.5076116607195214e-6,2.7511044450093634,0.424,0.163,0.00119252082362914,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Reln,1.5979220398168284e-6,4.703798730231007,0.227,0.035,0.00126395633349511,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-2810013P06Rik,1.912099953477814e-6,-2.476110359783928,0.076,0.39,0.00151247106320095,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl17,3.010139697156483e-6,-0.5401268526550824,1,0.988,0.00238102050045077,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpsa,3.675014450117356e-6,-0.5928499562079974,1,1,0.00290693643004282,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Spats2l,4.982116749857971e-6,2.76519927489515,0.303,0.081,0.00394085434913765,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Arhgef12,5.739892511291018e-6,0.7229075531787116,0.894,0.709,0.00454025497643119,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Snu13,6.572070930936938e-6,-0.8164580811023341,0.742,0.895,0.00519850810637111,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mrpl57,9.721268095235355e-6,-1.2229914228152166,0.258,0.599,0.00768952306333116,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Idi1,1.2095787148578674e-5,-2.925557889848603,0.045,0.32,0.00956776763452573,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sst,1.5457730721134505e-5,7.404238448372099,0.106,0,0.01222706500041739,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-1110012L19Rik,2.5492454410309937e-5,-1.91929889937692,0.061,0.331,0.02016453143855516,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Grcc10,3.381381415384306e-5,-0.6676576354862458,0.833,0.919,0.02674672699568986,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Dok5,3.963893690916251e-5,-1.545278799248674,0.212,0.5,0.03135439909514755,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ltbp1,4.304775597437705e-5,-3.684218555114128,0.03,0.267,0.03405077497573224,1,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Myt1l,1.966618482055987e-23,-3.323685433618551,0.458,0.995,1.5555952193062854e-20,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Slco1c1,2.8136222420616755e-23,5.257911602016208,0.542,0.016,2.2255751934707857e-20,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Pax6,1.4470160349272057e-19,4.1223966313597264,0.646,0.084,1.1445896836274195e-16,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ube2c,1.4569342719615525e-15,5.861410054174792,0.438,0.032,1.152435009121588e-12,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Elk3,3.2106808593203656e-14,5.154818109052104,0.354,0.016,2.5396485597224093e-11,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rdm1,3.948944112207082e-14,4.73978060977326,0.354,0.016,3.1236147927558016e-11,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Nde1,6.985105166378493e-14,4.080050340650132,0.458,0.053,5.525218186605388e-11,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl13,2.2655670152951825e-13,0.6465493761374095,1,1,1.792063509098489e-10,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Phactr1,2.7213305653225733e-13,-1.7846771519883422,0.688,0.974,2.1525724771701552e-10,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cenpn,1.7573226823385052e-12,6.154818109052104,0.25,0,1.3900422417297574e-9,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mt2,2.8890029269659813e-12,6.114176124554758,0.271,0.005,2.285201315230091e-9,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl26,8.532478555098416e-12,0.709206043580755,1,0.995,6.749190537082847e-9,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Psrc1,2.4537800794101734e-11,4.186526968779442,0.312,0.021,1.940940042813447e-8,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ltbp1,6.089472335293401e-11,2.4918530963296748,0.542,0.116,4.81677261721708e-8,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tpbg,2.32348412184007e-10,3.9108925261660143,0.292,0.021,1.8378759403754954e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sgo2a,2.6091952055009547e-10,4.6853328257508835,0.229,0.005,2.0638734075512553e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fancd2,2.988390241876304e-10,4.399930606888636,0.25,0.011,2.3638166813241565e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fnbp1l,5.035859470977299e-10,-1.2593256761798346,0.708,0.974,3.983364841543043e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ctxn1,8.56759902049134e-10,-1.306228940496396,0.667,0.921,6.776970825208651e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpsa,1.1406608678513727e-9,0.7569644951280532,1,1,9.022627464704358e-7,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gprc5b,1.817875914101787e-9,2.546771995217907,0.458,0.1,1.4379398480545135e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hes1,2.2357817992222096e-9,5.939089417996667,0.208,0.005,1.7685034031847678e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Dlgap5,2.884880742894764e-9,4.154818109052104,0.229,0.011,2.2819406676297584e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Serf2,3.2041360224171703e-9,0.8859040129784248,0.979,0.958,2.534471593731982e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mef2c,3.292094790886614e-9,-3.450493037060854,0.292,0.7,2.604046979591312e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cenpu,9.139355336493424e-9,3.487393448138975,0.271,0.026,7.229230071166299e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gypc,1.1467941674687276e-8,5.154818109052104,0.167,0,9.071141864677635e-6,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Shisa2,2.521161920183034e-8,3.100370325029727,0.229,0.016,1.99423907886478e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Nyap2,2.6413787554451987e-8,-3.80300945178164,0.062,0.505,2.089330595557152e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Plxna4,3.508477510000883e-8,-2.1278070251395707,0.521,0.832,2.7752057104106987e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Dpysl2,5.4618135183157143e-8,-0.9189887381263888,0.896,0.979,4.3202944929877296e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ccnd1,6.842307673720099e-8,3.9390894179966662,0.25,0.026,5.412265369912597e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Zfp704,8.76399350446197e-8,-1.606923064152427,0.396,0.763,6.932318862029417e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sash1,1.0577030156574357e-7,2.792248029667396,0.292,0.042,8.366430853850317e-5,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Clic4,1.682015111592899e-7,1.3673627444322047,0.75,0.321,1.3304739532699828e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Gins2,1.713755445244602e-7,4.306821202497154,0.188,0.011,1.3555805571884805e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rpl19,2.048480793380159e-7,0.5424583732858506,1,1,1.6203483075637057e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Nexmif,2.3625901259998725e-7,-2.450493037060854,0.125,0.553,1.868808789665899e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hivep3,2.7681434544102124e-7,-1.7636944061979387,0.312,0.726,2.1896014724384784e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Snhg14,2.874681405356419e-7,-2.315661336485004,0.271,0.621,2.2738729916369277e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Prkar2b,2.9651420816775833e-7,-2.4962335821268247,0.146,0.553,2.3454273866069684e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Hnrnpa1,3.748071993180185e-7,0.58451591503708,1,0.995,2.9647249466055263e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cep170,8.803466815678595e-7,-1.3172265061973905,0.5,0.805,6.963542251201768e-4,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sept9,1.3270883162498118e-6,1.5254614889724945,0.562,0.216,0.0010497268581536,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ccnf,1.3652531501675465e-6,4.487393448138975,0.167,0.011,0.00107991524178252,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cdca5,1.4277058839011335e-6,4.569855608330948,0.146,0.005,0.00112931535416579,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Jakmip2,1.7784810085229231e-6,-1.7623408220102414,0.333,0.668,0.00140677847774163,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Srebf1,2.0033101668193424e-6,2.3999306068886357,0.333,0.079,0.0015846183419541,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tead1,2.109257422519879e-6,0.9796753983387724,0.875,0.568,0.00166842262121322,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Nhp2,2.2115859670976262e-6,1.1626802268250744,0.75,0.442,0.00174936449997422,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rplp2,3.3849003519714935e-6,0.5326991046914902,1,0.989,0.00267745617840945,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Cdh13,3.841424192197465e-6,-4.684700643578541,0.062,0.411,0.00303856653602819,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fau,3.9808496335979485e-6,0.3999306068886352,1,1,0.00314885206017597,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Klhl13,4.162950232690461e-6,1.321928094887362,0.333,0.079,0.00329289363405815,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tmeff1,5.083656088946104e-6,-1.0758914009030176,0.604,0.874,0.00402117196635636,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Pdzd11,5.6658169188251615e-6,1.2207060447085611,0.708,0.368,0.0044816611827907,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mrpl39,6.803738732699607e-6,1.3999306068886352,0.562,0.237,0.00538175733756538,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rab28,7.884550763934801e-6,1.2116639694568136,0.646,0.316,0.00623667965427242,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mybl2,8.695565442464707e-6,3.363404730863521,0.167,0.016,0.00687819226498958,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Fadd,1.0606916711615404e-5,2.363404730863521,0.25,0.047,0.00839007111888778,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Wdr76,1.1549887065094308e-5,1.9848931076097915,0.333,0.089,0.00913596066848959,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Rabl3,1.4877303895943996e-5,2.247927513443585,0.271,0.058,0.0117679473816917,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Tcf7l1,1.8303200981758353e-5,3.2072855289462394,0.188,0.026,0.01447783197657085,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Dera,1.9055719011731244e-5,1.8853574340588772,0.271,0.058,0.01507307373827941,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Anxa5,1.9497328212797814e-5,3.100370325029727,0.188,0.026,0.01542238661632307,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ptgfrn,2.01359941719158e-5,2.2897476891382125,0.292,0.074,0.01592757138998539,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mamld1,2.1740721028084964e-5,1.8244284354165456,0.292,0.068,0.0171969103332152,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mapkapk2,2.6375804133283053e-5,1.4478650839523377,0.583,0.289,0.02086326106942689,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Usp22,3.989699051139783e-5,-0.8695300681045913,0.75,0.853,0.03155851949451568,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ppp6r2,4.919947636860664e-5,-1.3370349872775709,0.396,0.637,0.03891678580756785,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Eef1g,6.034615787877335e-5,0.5040258720670026,1,0.963,0.04773381088210972,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Ostm1,6.29202207761801e-5,1.9848931076097915,0.375,0.137,0.04976989463395846,2,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Sema3c,2.4954343172277804e-21,2.9574543050339153,0.782,0.181,1.973888544927174e-18,0,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-Mef2c,3.406555704155249e-10,-2.8756396616240787,0.41,0.719,2.6945855619868024e-7,0,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
-E330009J07Rik,8.012315036773396e-8,1.4981059612409882,0.615,0.288,6.337741194087757e-5,0,seurat_posthocfilt_mad_doubletfinder_soupx_emptydrops_test
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diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test.rds
index cc10a7c..a25500c 100644
Binary files a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test_markergenes.csv
index a16e5bc..dc3614b 100644
--- a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,182 +1,180 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
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-Mt2,4.0599485460225853e-16,4.888529392737881,0.328,0.005,3.31291801355443e-13,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
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-Ltbp1,4.278998004417843e-11,2.399899487160404,0.508,0.118,3.4916623716049595e-8,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
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-Clic4,2.8334291429497543e-9,1.3990863412564971,0.77,0.328,2.3120781806469997e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Usp22,3.161515380932678e-9,-1.1636751214533156,0.689,0.868,2.579796550841066e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Hivep3,3.416196641797067e-9,-1.772885168421149,0.295,0.735,2.787616459706407e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tmeff1,4.112378822202862e-9,-1.2918945961157715,0.557,0.873,3.3557011189175357e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tcf7l1,5.436261907505851e-9,3.549042926466213,0.262,0.029,4.435989716524774e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Cdca5,7.598184023349711e-9,4.989615517852195,0.18,0.005,6.200118163053363e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Metrn,8.758300245105066e-9,4.404653017131039,0.18,0.005,7.146773000005734e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Nexmif,9.82038997006936e-9,-2.543714214453639,0.131,0.554,8.013438215576598e-6,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Shisa2,1.4054849820595796e-8,3.156725503687453,0.213,0.015,1.1468757453606167e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Zfp704,1.5089189157272145e-8,-1.3251435040695994,0.443,0.789,1.2312778352334073e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Ptgfrn,1.799890991056615e-8,2.503528267213845,0.361,0.078,1.468711048702198e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl19,2.1449615758303983e-8,0.5196222433341453,1,1,1.7502886458776046e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Jakmip2,2.4087271644674982e-8,-1.856571318926005,0.344,0.686,1.9655213662054785e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Srebf1,3.9970189967837154e-8,2.5490429264662136,0.361,0.083,3.2615675013755115e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Klhl13,4.613682534121456e-8,1.6320635132341113,0.377,0.088,3.764764947843108e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Prkar2b,1.1257747678958763e-7,-2.1969114509272476,0.213,0.569,9.18632210603035e-5,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Sash1,3.0565623385175986e-7,2.7416880044086094,0.262,0.044,2.4941548682303605e-4,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mrpl39,5.386477341657929e-7,1.4022015381369424,0.574,0.24,4.39536551079287e-4,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-C030005K06Rik,1.0057363625852273e-6,5.8291508456589485,0.115,0,8.206808718695455e-4,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tead1,1.0791771902688898e-6,1.1089497791180394,0.852,0.574,8.806085872594141e-4,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Cdh13,1.200875276422258e-6,-3.983962276529762,0.098,0.422,9.799142255605623e-4,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Pdzd11,1.3190876592522617e-6,1.2510528862356065,0.689,0.363,0.00107637552994984,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gins2,1.6587533512837664e-6,3.5072227507715867,0.18,0.02,0.00135354273464755,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Iqgap3,1.8192274324368205e-6,4.549042926466213,0.131,0.005,0.00148448958486844,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Hnrnpa1,1.9106929501132464e-6,0.5165502063333438,1,0.995,0.0015591254472924,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mastl,1.959647469847722e-6,3.0217959236013447,0.18,0.02,0.00159907233539574,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Nsl1,2.9350323072482732e-6,2.8791915281585445,0.148,0.01,0.00239498636271459,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Selenow,3.267507324119274e-6,-0.628220119380575,1,0.985,0.00266628597648132,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gabbr1,3.6796426242948055e-6,-1.3220066709087803,0.443,0.696,0.00300258838142456,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Idi1,4.02687775532359e-6,2.688248745447149,0.459,0.216,0.00328593224834404,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Ostm1,4.320223940224165e-6,1.9546817277428077,0.426,0.167,0.00352530273522291,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Kdm5b,5.104420755753042e-6,-0.8314973285361933,0.639,0.863,0.00416520733669448,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tgfbr2,6.230462050260877e-6,5.326650505129765,0.098,0,0.00508405703301287,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fadd,6.928339346832079e-6,2.3266505051297655,0.23,0.044,0.00565352490701497,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Scnm1,7.437418348741682e-6,0.999184226700973,0.656,0.319,0.00606893337257321,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Anxa5,9.031646377188768e-6,2.667687422964833,0.213,0.039,0.00736982344378603,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Syn1,9.742287077872488e-6,-2.5802400904787532,0.066,0.358,0.00794970625554395,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl17,1.0631685042445332e-5,0.4657213655559724,1,0.99,0.00867545499463539,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fabp3,1.0973457147060278e-5,-3.6506294183701504,0.016,0.284,0.00895434103200118,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Eepd1,1.2865300728024522e-5,2.8636785287872195,0.262,0.069,0.01049808539406801,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rtkn,1.3523338408518888e-5,3.326650505129765,0.131,0.01,0.01103504414135141,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tom1l1,1.5551908055782244e-5,2.571763002966297,0.197,0.034,0.01269035697351831,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Nhp2,1.7300504379975188e-5,1.035973344226843,0.689,0.456,0.01411721157405975,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Dync2li1,1.7371339537166083e-5,1.9574166954640464,0.361,0.132,0.01417501306232752,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rplp2,2.253794952007316e-5,0.45099173179790863,1,0.995,0.01839096680837969,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rab28,2.3399031989805652e-5,1.082028136409852,0.623,0.338,0.01909361010368141,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Wdr76,2.9934228534946818e-5,1.7982715327749763,0.311,0.098,0.0244263304845166,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fau,3.1270462005332575e-5,0.3379016401044739,1,1,0.02551669699635138,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Eef1g,3.344983215000908e-5,0.4650645338268604,0.984,0.966,0.02729506303440741,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Prmt2,3.3500898357428914e-5,-1.1490829258366322,0.426,0.662,0.02733673305966199,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gsx2,3.849264512530338e-5,4.549042926466213,0.082,0,0.03140999842224756,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rhcg,3.850461343074364e-5,5.063616099295971,0.082,0,0.03141976455948681,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Adamts2,4.139848612856184e-5,-5.387595012536357,0,0.23,0.03378116468090646,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rabl3,5.300267643723937e-5,2.04654258593703,0.246,0.064,0.04325018397278733,3,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gad2,2.5262707693232797e-24,4.324787749026603,0.683,0.099,2.0614369477677958e-21,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Cntnap5c,1.145761280243392e-15,3.969692790204041,0.46,0.054,9.34941204678608e-13,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Tox2,2.3317961796616487e-12,4.716555468982599,0.302,0.02,1.902745682603905e-9,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl13,9.083375992740774e-12,-0.6751043899557487,1,1,7.412034810076472e-9,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Hsp90ab1,2.3825737339380823e-11,-0.7989736837733483,1,1,1.9441801668934753e-8,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mef2c,2.690725855234686e-10,1.2358102671742648,0.937,0.535,2.1956322978715042e-7,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl19,7.084888223173085e-10,-0.6409965356354839,1,1,5.781268790109237e-7,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mmd2,8.727531350327656e-10,-3.079880776868696,0.063,0.52,7.121665581867368e-7,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rplp2,4.465291783364606e-9,-0.7048389222883449,1,0.995,3.643678095225519e-6,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Lmo1,5.854182791101878e-9,-2.520702301917773,0.111,0.53,4.777013157539133e-6,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Sema3c,8.028105878570541e-9,-3.955693061291771,0.063,0.465,6.55093439691356e-6,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl26,8.075826483734067e-9,-0.5790504454776442,1,0.995,6.5898744107269986e-6,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Insm1,1.1478960111787705e-8,-2.219740513621483,0.286,0.658,9.366831451218769e-6,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Zfp704,2.1749257722829533e-8,1.3828502063188837,0.889,0.653,1.7747394301828897e-5,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Palmd,3.5226017924918596e-8,-2.9955292959547744,0.063,0.45,2.874443062673357e-5,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Zfhx4,5.1051196953897815e-8,-3.1825664408432597,0.063,0.45,4.165777671438061e-5,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Hivep3,1.084182990397258e-7,1.201188370585219,0.841,0.569,8.846933201641624e-5,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl5,1.1772272549514297e-7,-0.7313029567460045,0.921,0.975,9.606174400403664e-5,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Eef1g,1.786598770639639e-7,-0.7372662809202932,0.952,0.975,1.457864596841945e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Serf2,2.663564986619849e-7,-0.7250608004239587,0.952,0.97,2.173469029081797e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Snhg14,3.12208952593818e-7,1.323997014536603,0.762,0.5,2.547625053165555e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpl17,8.356430928438799e-7,-0.5786514213929861,1,0.99,6.81884763760606e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Dok5,9.09793913750168e-7,-2.3009210940378626,0.175,0.515,7.42391833620137e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mrpl57,9.127332296868948e-7,-1.4102163288063172,0.238,0.619,7.447903154245061e-4,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Idi1,1.3567722128646604e-6,-3.613689189639749,0.032,0.347,0.00110712612569756,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Sst,1.6809232940622712e-6,7.747020749709651,0.111,0,0.00137163340795481,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Reln,3.1077474774006975e-6,4.524206055564425,0.238,0.05,0.00253592194155896,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Iqsec1,3.454975673240004e-6,2.665501518682272,0.413,0.168,0.00281926014936384,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Nbdy,5.007024079403737e-6,-1.5207023019177726,0.127,0.47,0.00408573164879344,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Spats2l,6.0584383768863825e-6,2.201763722553319,0.349,0.114,0.00494368571553928,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gm4258,6.634353757826815e-6,1.0943174326595635,0.889,0.752,0.00541363266638668,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Snu13,6.649893378416031e-6,-0.82529427086436,0.746,0.896,0.00542631299678748,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Vps36,6.714937107915125e-6,-1.6097456016510447,0.143,0.475,0.00547938868005874,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Gtf2a2,7.436327401929597e-6,-0.7113858635268822,0.683,0.881,0.00606804315997455,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Hnrnpa1,1.07274925795792e-5,-0.5440542387327358,1,0.995,0.00875363394493662,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-2810013P06Rik,1.6616749098047242e-5,-1.9772799234999168,0.095,0.386,0.01355926726400654,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Atp1b1,2.9322338100483345e-5,1.9317396627524128,0.508,0.287,0.0239270278899944,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rpsa,3.150286386037395e-5,-0.56217736055831,1,1,0.02570633691006514,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Drg2,3.15078198049102e-5,-1.451518736771771,0.143,0.446,0.02571038096080672,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-1110012L19Rik,3.185295263631979e-5,-2.3190684407481217,0.063,0.327,0.02599200935123695,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fam216a,3.3483257293920264e-5,-1.297694789955555,0.159,0.475,0.02732233795183893,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Rian,3.390386831646367e-5,1.704778301206246,0.508,0.267,0.02766555654623435,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Snrpb2,3.730117149035007e-5,-0.8692655233086016,0.444,0.743,0.03043775593612566,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Csad,3.803996291297152e-5,-1.807354922057604,0.095,0.371,0.03104060973698475,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-BC043934,5.567732675354313e-5,4.265894059973034,0.079,0,0.04543269863089119,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Kif26b,6.006288363596465e-5,-3.515465653551625,0.063,0.312,0.04901131304694715,1,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fbn2,8.3193514941015e-14,1.8104007544926235,0.738,0.255,6.788590819186824e-11,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Fabp3,1.865406274046567e-12,2.146944482894868,0.557,0.123,1.5221715196219984e-9,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Mef2c,2.223728173703091e-12,1.7120126499889436,0.885,0.554,1.8145621897417222e-9,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Ctxn1,5.912205415347416e-12,0.9984634197707212,0.951,0.838,4.824359618923491e-9,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Dok5,1.0789870396289578e-11,2.1392077424294236,0.721,0.348,8.804534243372296e-9,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
-Cdh13,1.3776817129882922e-8,1.2509079427441607,0.656,0.255,1.1241882777984464e-5,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
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-Tcf4,4.5269045570858256e-8,-0.6418553059328005,1,1,3.693954118582034e-5,2,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
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+Tmeff1,1.5256291445497929e-6,0.8040031281915462,0.924,0.746,0.00124643901109718,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Adamts2,1.5931453705148282e-6,2.2104204318831724,0.367,0.122,0.00130159976771061,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Zfhx4,1.6464994492753385e-6,1.6111026381849465,0.57,0.265,0.00134519005005795,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Palmd,2.058575985073258e-6,1.212006682775124,0.57,0.26,0.00168185657980485,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Plxna4,3.194989644933915e-6,0.8313169004023937,0.899,0.674,0.002610306539911,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Pappa2,1.4251590456853183e-5,3.2664544667975,0.139,0.011,0.01164354940324905,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
+Atp1b1,2.7215275916601205e-5,-2.154432108178031,0.165,0.414,0.02223488042386318,0,seurat_posthocfilt_mad_scdblfinder_soupx_emptydrops_test
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test.rds
index 1a5b8ad..282d31f 100644
Binary files a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test_markergenes.csv
index eea057f..07b295f 100644
--- a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,107 +1,117 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
-Myt1l,4.516938351096391e-16,-2.3665423074211978,0.467,1,3.423839270131065e-13,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Phactr1,1.418506512238045e-12,-1.8266744826763783,0.689,0.99,1.075227936276438e-9,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Slco1c1,2.0404260844172426e-12,6.599912842187128,0.444,0,1.5466429719882702e-9,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Ube2c,1.3038616081150898e-11,7.636839411185486,0.467,0.021,9.88327098951238e-9,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Nde1,1.7996830007430274e-11,4.133594837964591,0.556,0.062,1.3641597145632148e-8,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Ltbp1,6.229966461665712e-11,3.284937507941532,0.6,0.093,4.7223145779426095e-8,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Pax6,8.408017073159625e-11,3.647218556965485,0.6,0.103,6.373276941454997e-8,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Ctxn1,1.4488789859167455e-10,-1.3104416087249624,0.711,0.979,1.0982502713248933e-7,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Nexmif,2.7622374141131355e-10,-2.5285648746861957,0.156,0.773,2.093775959897757e-7,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Rdm1,1.0088467934045787e-9,5.014950341465972,0.378,0.01,7.647058694006707e-7,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Elk3,8.787294717462247e-9,6.152453865215906,0.311,0,6.660769395836383e-6,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Mef2c,3.1845475382341435e-8,-3.324615414537448,0.222,0.691,2.4138870339814804e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Dpysl2,4.6550382123170594e-8,-0.8428860298290008,0.978,1,3.528518964936331e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Clic4,5.097663486564672e-8,1.828905674660382,0.8,0.371,3.864028922816021e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Nyap2,7.119944178640655e-8,-2.699295176200151,0.111,0.619,5.396917687409616e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Psrc1,9.227440446825075e-8,4.223536963277389,0.333,0.021,6.994399858693405e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Usp22,9.793846598619313e-8,-1.0916125989789114,0.778,0.948,7.423735721753439e-5,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Cdh13,1.429812420834587e-7,-4.41550221019956,0.089,0.557,1.0837978149926168e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Selenow,1.9004912552027825e-7,-0.7444350444370911,1,1,1.440572371443709e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Fnbp1l,2.244082143775156e-7,-1.0230460066943312,0.844,0.99,1.7010142649815684e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Cenpu,3.456705641026692e-7,3.9154146679150577,0.311,0.021,2.620182875898232e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Hes1,4.564780081346044e-7,6.277984747299765,0.244,0,3.460103301660301e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Cenpn,4.591285399486396e-7,5.355987259301038,0.244,0,3.480194332810688e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Prkar2b,5.335294713105655e-7,-2.161400929135774,0.222,0.66,4.0441533925340866e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Rpl13,5.739133478625485e-7,0.37046497809170287,1,1,4.350263176798118e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Mt2,8.191284043819589e-7,5.317513111486403,0.267,0.01,6.208993305215248e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Plxna4,8.981091521650046e-7,-1.7241605245317912,0.533,0.835,6.807667373410735e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Rpsa,9.024478204099836e-7,0.5625728454922285,1,1,6.840554478707675e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Serf2,1.2028264490939824e-6,0.7250738299186503,0.978,0.969,9.117424484132386e-4,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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-Dlgap5,1.665976413763347e-6,5.195522587107792,0.222,0,0.00126281012163261,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Klhl13,2.0765850586734623e-6,2.4035156293836244,0.333,0.041,0.00157405147447448,1,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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-Fbn2,1.2684071388700778e-6,2.7179108543674984,0.577,0.156,9.61452611263519e-4,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Jakmip2,1.53328495447851e-6,1.5450742575052825,0.794,0.422,0.00116222999549471,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Fancd2,1.6617429435611794e-6,-4.915414667915057,0,0.222,0.00125960115121937,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Dlgap5,1.665976413763347e-6,-5.195522587107792,0,0.222,0.00126281012163261,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Klhl13,2.0765850586734623e-6,-2.4035156293836244,0.041,0.333,0.00157405147447448,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Tpbg,2.0786216555356943e-6,-3.178449073748851,0.031,0.311,0.00157559521489605,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Mrpl39,3.0576885679746487e-6,-1.5555187228286742,0.278,0.667,0.00231772793452478,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Ccnd1,4.3889123909200945e-6,-4.652380262081263,0.021,0.267,0.00332679559231743,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
-Gprc5b,4.6092172525801805e-6,-2.207595419408367,0.124,0.467,0.00349378667745577,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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+Fnbp1l,9.006731399021781e-6,0.8740736964964015,1,0.792,0.00689915625165068,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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+Rpl19,1.2974532812717617e-5,-0.36009444923156586,1,1,0.00993849213454169,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Prmt2,1.4788151030226807e-5,1.1006159394500503,0.809,0.521,0.01132772368915373,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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+Rpl26,2.0622208344396257e-5,-0.41600143093867104,1,1,0.01579661159180753,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Sept9,3.2070224733367776e-5,-1.4619276314413672,0.303,0.646,0.02456579214575971,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Adamts2,3.902633358441435e-5,5.279154071197071,0.292,0,0.02989417152566139,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Fbn2,4.316511174231856e-5,1.196691911005098,0.483,0.125,0.03306447559461602,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Tpbg,5.013690017977818e-5,-2.727272197962362,0.056,0.312,0.03840486553771009,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
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+Cdca5,5.2981411492251365e-5,-4.060695931687554,0.011,0.208,0.04058376120306455,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
+Shisa2,5.6751922044740336e-5,-3.350202548882539,0.011,0.208,0.04347197228627109,0,seurat_posthocfilt_threshold_doubletfinder_soupx_emptydrops_test
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test.rds
index b7a3d42..0525d16 100644
Binary files a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test_markergenes.csv
index d30496d..ee5bf40 100644
--- a/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/posthocfilter/seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,113 +1,121 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
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+Mef2c,1.074963189372643e-9,3.5426318473279004,0.717,0.255,8.416961772787794e-7,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Psrc1,3.737977554784505e-9,-4.792460706757909,0.019,0.353,2.9268364253962674e-6,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Usp22,4.331008892449766e-9,1.1210025427740953,0.934,0.804,3.391179962788167e-6,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Cenpn,5.21255821729615e-9,-5.810382614755173,0,0.294,4.081433084142886e-6,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Ltbp1,9.977034274174223e-9,-2.95881909318003,0.104,0.51,7.812017836678417e-6,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Hes1,1.8620709095487624e-8,-6.610083964269341,0,0.275,1.4580015221766807e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Fnbp1l,2.01927477264406e-8,1.08405623980709,1,0.804,1.581092146980299e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Tcf7l1,3.3850901538675395e-8,-4.962385708200222,0.009,0.294,2.650525590478283e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Dlgap5,6.645329761615091e-8,-6.099889231950158,0,0.255,5.203293203344617e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Jakmip2,8.567516532265914e-8,1.623794770677606,0.802,0.431,6.70836544476421e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Cdh13,1.0662732959327354e-7,3.9624267954055585,0.557,0.118,8.348919907153318e-5,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Gypc,2.2947854356289754e-7,-4.962385708200223,0,0.235,1.7968169960974877e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Prkar2b,2.881172831299728e-7,2.050704291240222,0.679,0.275,2.2559583269076872e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Mrpl39,3.235672984654501e-7,-1.6835263352047458,0.264,0.667,2.5335319469844736e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Tpbg,3.329506809287727e-7,-3.4340067358454336,0.028,0.314,2.6070038316722895e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Serf2,4.035763582010364e-7,-0.7358958237643143,0.962,0.98,3.160002884714115e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Sgo2a,4.309636243919468e-7,-4.64045761331286,0.009,0.255,3.374445178988943e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Tmeff1,7.418558198582348e-7,1.0506063120190974,0.953,0.647,5.808731069489979e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Gprc5b,7.890151871115735e-7,-2.2778875339281512,0.123,0.471,6.177988915083621e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Fancd2,8.028216387543561e-7,-5.142957953842044,0,0.216,6.286093431446608e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Ccnd1,8.194056623971423e-7,-4.125884440483102,0.038,0.314,6.415946336569625e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Snhg14,1.1116775358015293e-6,1.7317755634225684,0.689,0.333,8.704435105325975e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Pdzd11,1.2236531689673186e-6,-1.2750614898493882,0.443,0.824,9.581204313014104e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Zfp704,1.2335325016323033e-6,0.9665311937382954,0.858,0.451,9.658559487780936e-4,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Prmt2,2.1869114545815093e-6,1.0645046635189264,0.84,0.549,0.00171235166893732,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Metrn,2.7401020149459797e-6,-5.447812535370464,0,0.196,0.0021454998777027,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Rpl13,3.5858251815789595e-6,-0.3533685248741678,1,1,0.00280770111717632,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Ccnf,5.189893758149186e-6,-4.755934830732796,0.009,0.216,0.00406368681263081,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Klhl13,5.24030642876271e-6,-3.1709723300116397,0.075,0.353,0.0041031599337212,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Rpsa,7.362759207915504e-6,-0.5109533976286631,1,1,0.00576504045979784,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Fbn2,8.076740858598917e-6,1.346603330979642,0.575,0.196,0.00632408809228295,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Shisa2,9.285048264157956e-6,-4.377423207479066,0,0.176,0.00727019279083568,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
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+Rusc1,1.1568444897752712e-5,2.3850774787942775,0.462,0.118,0.00905809235494037,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Tead1,1.3547014776204468e-5,-1.228977933447205,0.623,0.843,0.01060731256976809,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Trim35,1.9344557575723944e-5,0.8966763623176814,0.906,0.706,0.01514678858179184,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Zfhx4,2.044553534788929e-5,-1.5616804999287428,0.311,0.608,0.01600885417739731,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Ptgfrn,2.178388283535206e-5,-2.340897331453952,0.113,0.392,0.01705678026008066,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Adamts2,2.934918396767662e-5,5.353895823545998,0.283,0,0.02298041104669079,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Dnase2a,3.105719819898643e-5,-4.225420114034017,0,0.157,0.02431778618980637,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
+Rpl26,4.043445221267401e-5,-0.38786495420071265,1,1,0.03166017608252375,0,seurat_posthocfilt_threshold_scdblfinder_soupx_emptydrops_test
diff --git a/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test.rds
index 2d61abc..537e23f 100644
Binary files a/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test_markergenes.csv
index d0ad1e1..a5b576e 100644
--- a/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/scdblfinder/seurat_scdblfinder_soupx_emptydrops_test_markergenes.csv
@@ -1,182 +1,180 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
-Myt1l,1.1616535304039446e-29,-3.656343069564545,0.41,0.995,9.47909280809619e-27,3,seurat_scdblfinder_soupx_emptydrops_test
-Slco1c1,7.425446487137665e-26,5.534245924538133,0.541,0.015,6.059164333504335e-23,3,seurat_scdblfinder_soupx_emptydrops_test
-Pax6,2.2519079553978654e-20,3.796970439909799,0.623,0.088,1.8375568916046582e-17,3,seurat_scdblfinder_soupx_emptydrops_test
-Ube2c,4.769021480652217e-19,5.949087711269584,0.475,0.034,3.89152152821221e-16,3,seurat_scdblfinder_soupx_emptydrops_test
-Nde1,1.1194860158648132e-18,4.667687422964833,0.492,0.044,9.135005889456878e-16,3,seurat_scdblfinder_soupx_emptydrops_test
-Rdm1,1.4528131709827519e-18,4.7416880044086085,0.426,0.02,1.1854955475219256e-15,3,seurat_scdblfinder_soupx_emptydrops_test
-Cenpn,1.592433780676524e-16,6.8291508456589485,0.311,0,1.2994259650320436e-13,3,seurat_scdblfinder_soupx_emptydrops_test
-Mt2,4.0599485460225853e-16,4.888529392737881,0.328,0.005,3.31291801355443e-13,3,seurat_scdblfinder_soupx_emptydrops_test
-Elk3,3.178025872737445e-15,4.648578600017127,0.361,0.02,2.593269112153755e-12,3,seurat_scdblfinder_soupx_emptydrops_test
-Phactr1,3.950440904026488e-15,-1.6545622559920776,0.672,0.975,3.2235597776856146e-12,3,seurat_scdblfinder_soupx_emptydrops_test
-Rpl13,1.0542971763119703e-14,0.6527734466142681,1,1,8.60306495870568e-12,3,seurat_scdblfinder_soupx_emptydrops_test
-Psrc1,2.4469571103714232e-14,4.549042926466213,0.344,0.02,1.996717002063081e-11,3,seurat_scdblfinder_soupx_emptydrops_test
-Sgo2a,9.275101962592852e-14,5.496575506572078,0.279,0.005,7.568483201475768e-11,3,seurat_scdblfinder_soupx_emptydrops_test
-Fnbp1l,2.561652064771999e-13,-1.3368567722263318,0.738,0.975,2.0903080848539507e-10,3,seurat_scdblfinder_soupx_emptydrops_test
-Hes1,6.36512956582993e-13,6.134005427187369,0.262,0.005,5.193945725717222e-10,3,seurat_scdblfinder_soupx_emptydrops_test
-Ctxn1,6.484488148054099e-13,-1.4488339016408165,0.672,0.922,5.291342328812144e-10,3,seurat_scdblfinder_soupx_emptydrops_test
-Serf2,3.111980029697316e-12,0.8865616337955542,0.984,0.961,2.5393757042330094e-9,3,seurat_scdblfinder_soupx_emptydrops_test
-Rpl26,4.270081757983607e-12,0.6485786000171281,1,0.995,3.484386714514623e-9,3,seurat_scdblfinder_soupx_emptydrops_test
-Dlgap5,6.252214068500175e-12,4.829150845658949,0.262,0.01,5.101806679896143e-9,3,seurat_scdblfinder_soupx_emptydrops_test
-Tpbg,6.785263009186143e-12,4.174647411684716,0.295,0.02,5.536774615495892e-9,3,seurat_scdblfinder_soupx_emptydrops_test
-Mef2c,3.0233279255075386e-11,-3.5197353515191994,0.328,0.721,2.467035587214152e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Ccnd1,3.775573154988e-11,4.2652499604656215,0.295,0.025,3.0808676944702084e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Fancd2,3.798633706986263e-11,4.61615712232475,0.246,0.01,3.0996851049007915e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Ltbp1,4.278998004417843e-11,2.399899487160404,0.508,0.118,3.4916623716049595e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Plxna4,5.6896535022838336e-11,-2.351239597318541,0.443,0.824,4.642757257863609e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Snhg14,9.900729887484688e-11,-2.5456598587686083,0.23,0.662,8.078995588187507e-8,3,seurat_scdblfinder_soupx_emptydrops_test
-Nyap2,1.6698988441328572e-10,-4.263936544785269,0.049,0.51,1.3626374568124113e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Cenpu,2.2309299731104867e-10,3.8005816934621777,0.279,0.025,1.820438858058157e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Dpysl2,2.2560591917901074e-10,-0.9852482351936972,0.852,0.98,1.840944300500728e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Rpsa,2.7305403563564383e-10,0.7491825409555335,1,1,2.2281209307868538e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Gypc,6.415413278317017e-10,5.549042926466213,0.18,0,5.234977235106687e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Sept9,9.802859703180062e-10,1.9034390744052216,0.607,0.221,7.999133517794933e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Gprc5b,1.0197496761980535e-9,2.5301838992148977,0.426,0.098,8.321157357776118e-7,3,seurat_scdblfinder_soupx_emptydrops_test
-Ccnf,1.4450399792289003e-9,5.014706498815025,0.213,0.01,1.1791526230507829e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Cep170,2.0507631939715448e-9,-1.419775418285507,0.557,0.838,1.6734227662807806e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Clic4,2.8334291429497543e-9,1.3990863412564971,0.77,0.328,2.3120781806469997e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Usp22,3.161515380932678e-9,-1.1636751214533156,0.689,0.868,2.579796550841066e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Hivep3,3.416196641797067e-9,-1.772885168421149,0.295,0.735,2.787616459706407e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Tmeff1,4.112378822202862e-9,-1.2918945961157715,0.557,0.873,3.3557011189175357e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Tcf7l1,5.436261907505851e-9,3.549042926466213,0.262,0.029,4.435989716524774e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Cdca5,7.598184023349711e-9,4.989615517852195,0.18,0.005,6.200118163053363e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Metrn,8.758300245105066e-9,4.404653017131039,0.18,0.005,7.146773000005734e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Nexmif,9.82038997006936e-9,-2.543714214453639,0.131,0.554,8.013438215576598e-6,3,seurat_scdblfinder_soupx_emptydrops_test
-Shisa2,1.4054849820595796e-8,3.156725503687453,0.213,0.015,1.1468757453606167e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Zfp704,1.5089189157272145e-8,-1.3251435040695994,0.443,0.789,1.2312778352334073e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Ptgfrn,1.799890991056615e-8,2.503528267213845,0.361,0.078,1.468711048702198e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Rpl19,2.1449615758303983e-8,0.5196222433341453,1,1,1.7502886458776046e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Jakmip2,2.4087271644674982e-8,-1.856571318926005,0.344,0.686,1.9655213662054785e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Srebf1,3.9970189967837154e-8,2.5490429264662136,0.361,0.083,3.2615675013755115e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Klhl13,4.613682534121456e-8,1.6320635132341113,0.377,0.088,3.764764947843108e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Prkar2b,1.1257747678958763e-7,-2.1969114509272476,0.213,0.569,9.18632210603035e-5,3,seurat_scdblfinder_soupx_emptydrops_test
-Sash1,3.0565623385175986e-7,2.7416880044086094,0.262,0.044,2.4941548682303605e-4,3,seurat_scdblfinder_soupx_emptydrops_test
-Mrpl39,5.386477341657929e-7,1.4022015381369424,0.574,0.24,4.39536551079287e-4,3,seurat_scdblfinder_soupx_emptydrops_test
-C030005K06Rik,1.0057363625852273e-6,5.8291508456589485,0.115,0,8.206808718695455e-4,3,seurat_scdblfinder_soupx_emptydrops_test
-Tead1,1.0791771902688898e-6,1.1089497791180394,0.852,0.574,8.806085872594141e-4,3,seurat_scdblfinder_soupx_emptydrops_test
-Cdh13,1.200875276422258e-6,-3.983962276529762,0.098,0.422,9.799142255605623e-4,3,seurat_scdblfinder_soupx_emptydrops_test
-Pdzd11,1.3190876592522617e-6,1.2510528862356065,0.689,0.363,0.00107637552994984,3,seurat_scdblfinder_soupx_emptydrops_test
-Gins2,1.6587533512837664e-6,3.5072227507715867,0.18,0.02,0.00135354273464755,3,seurat_scdblfinder_soupx_emptydrops_test
-Iqgap3,1.8192274324368205e-6,4.549042926466213,0.131,0.005,0.00148448958486844,3,seurat_scdblfinder_soupx_emptydrops_test
-Hnrnpa1,1.9106929501132464e-6,0.5165502063333438,1,0.995,0.0015591254472924,3,seurat_scdblfinder_soupx_emptydrops_test
-Mastl,1.959647469847722e-6,3.0217959236013447,0.18,0.02,0.00159907233539574,3,seurat_scdblfinder_soupx_emptydrops_test
-Nsl1,2.9350323072482732e-6,2.8791915281585445,0.148,0.01,0.00239498636271459,3,seurat_scdblfinder_soupx_emptydrops_test
-Selenow,3.267507324119274e-6,-0.628220119380575,1,0.985,0.00266628597648132,3,seurat_scdblfinder_soupx_emptydrops_test
-Gabbr1,3.6796426242948055e-6,-1.3220066709087803,0.443,0.696,0.00300258838142456,3,seurat_scdblfinder_soupx_emptydrops_test
-Idi1,4.02687775532359e-6,2.688248745447149,0.459,0.216,0.00328593224834404,3,seurat_scdblfinder_soupx_emptydrops_test
-Ostm1,4.320223940224165e-6,1.9546817277428077,0.426,0.167,0.00352530273522291,3,seurat_scdblfinder_soupx_emptydrops_test
-Kdm5b,5.104420755753042e-6,-0.8314973285361933,0.639,0.863,0.00416520733669448,3,seurat_scdblfinder_soupx_emptydrops_test
-Tgfbr2,6.230462050260877e-6,5.326650505129765,0.098,0,0.00508405703301287,3,seurat_scdblfinder_soupx_emptydrops_test
-Fadd,6.928339346832079e-6,2.3266505051297655,0.23,0.044,0.00565352490701497,3,seurat_scdblfinder_soupx_emptydrops_test
-Scnm1,7.437418348741682e-6,0.999184226700973,0.656,0.319,0.00606893337257321,3,seurat_scdblfinder_soupx_emptydrops_test
-Anxa5,9.031646377188768e-6,2.667687422964833,0.213,0.039,0.00736982344378603,3,seurat_scdblfinder_soupx_emptydrops_test
-Syn1,9.742287077872488e-6,-2.5802400904787532,0.066,0.358,0.00794970625554395,3,seurat_scdblfinder_soupx_emptydrops_test
-Rpl17,1.0631685042445332e-5,0.4657213655559724,1,0.99,0.00867545499463539,3,seurat_scdblfinder_soupx_emptydrops_test
-Fabp3,1.0973457147060278e-5,-3.6506294183701504,0.016,0.284,0.00895434103200118,3,seurat_scdblfinder_soupx_emptydrops_test
-Eepd1,1.2865300728024522e-5,2.8636785287872195,0.262,0.069,0.01049808539406801,3,seurat_scdblfinder_soupx_emptydrops_test
-Rtkn,1.3523338408518888e-5,3.326650505129765,0.131,0.01,0.01103504414135141,3,seurat_scdblfinder_soupx_emptydrops_test
-Tom1l1,1.5551908055782244e-5,2.571763002966297,0.197,0.034,0.01269035697351831,3,seurat_scdblfinder_soupx_emptydrops_test
-Nhp2,1.7300504379975188e-5,1.035973344226843,0.689,0.456,0.01411721157405975,3,seurat_scdblfinder_soupx_emptydrops_test
-Dync2li1,1.7371339537166083e-5,1.9574166954640464,0.361,0.132,0.01417501306232752,3,seurat_scdblfinder_soupx_emptydrops_test
-Rplp2,2.253794952007316e-5,0.45099173179790863,1,0.995,0.01839096680837969,3,seurat_scdblfinder_soupx_emptydrops_test
-Rab28,2.3399031989805652e-5,1.082028136409852,0.623,0.338,0.01909361010368141,3,seurat_scdblfinder_soupx_emptydrops_test
-Wdr76,2.9934228534946818e-5,1.7982715327749763,0.311,0.098,0.0244263304845166,3,seurat_scdblfinder_soupx_emptydrops_test
-Fau,3.1270462005332575e-5,0.3379016401044739,1,1,0.02551669699635138,3,seurat_scdblfinder_soupx_emptydrops_test
-Eef1g,3.344983215000908e-5,0.4650645338268604,0.984,0.966,0.02729506303440741,3,seurat_scdblfinder_soupx_emptydrops_test
-Prmt2,3.3500898357428914e-5,-1.1490829258366322,0.426,0.662,0.02733673305966199,3,seurat_scdblfinder_soupx_emptydrops_test
-Gsx2,3.849264512530338e-5,4.549042926466213,0.082,0,0.03140999842224756,3,seurat_scdblfinder_soupx_emptydrops_test
-Rhcg,3.850461343074364e-5,5.063616099295971,0.082,0,0.03141976455948681,3,seurat_scdblfinder_soupx_emptydrops_test
-Adamts2,4.139848612856184e-5,-5.387595012536357,0,0.23,0.03378116468090646,3,seurat_scdblfinder_soupx_emptydrops_test
-Rabl3,5.300267643723937e-5,2.04654258593703,0.246,0.064,0.04325018397278733,3,seurat_scdblfinder_soupx_emptydrops_test
-Gad2,2.5262707693232797e-24,4.324787749026603,0.683,0.099,2.0614369477677958e-21,1,seurat_scdblfinder_soupx_emptydrops_test
-Cntnap5c,1.145761280243392e-15,3.969692790204041,0.46,0.054,9.34941204678608e-13,1,seurat_scdblfinder_soupx_emptydrops_test
-Tox2,2.3317961796616487e-12,4.716555468982599,0.302,0.02,1.902745682603905e-9,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpl13,9.083375992740774e-12,-0.6751043899557487,1,1,7.412034810076472e-9,1,seurat_scdblfinder_soupx_emptydrops_test
-Hsp90ab1,2.3825737339380823e-11,-0.7989736837733483,1,1,1.9441801668934753e-8,1,seurat_scdblfinder_soupx_emptydrops_test
-Mef2c,2.690725855234686e-10,1.2358102671742648,0.937,0.535,2.1956322978715042e-7,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpl19,7.084888223173085e-10,-0.6409965356354839,1,1,5.781268790109237e-7,1,seurat_scdblfinder_soupx_emptydrops_test
-Mmd2,8.727531350327656e-10,-3.079880776868696,0.063,0.52,7.121665581867368e-7,1,seurat_scdblfinder_soupx_emptydrops_test
-Rplp2,4.465291783364606e-9,-0.7048389222883449,1,0.995,3.643678095225519e-6,1,seurat_scdblfinder_soupx_emptydrops_test
-Lmo1,5.854182791101878e-9,-2.520702301917773,0.111,0.53,4.777013157539133e-6,1,seurat_scdblfinder_soupx_emptydrops_test
-Sema3c,8.028105878570541e-9,-3.955693061291771,0.063,0.465,6.55093439691356e-6,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpl26,8.075826483734067e-9,-0.5790504454776442,1,0.995,6.5898744107269986e-6,1,seurat_scdblfinder_soupx_emptydrops_test
-Insm1,1.1478960111787705e-8,-2.219740513621483,0.286,0.658,9.366831451218769e-6,1,seurat_scdblfinder_soupx_emptydrops_test
-Zfp704,2.1749257722829533e-8,1.3828502063188837,0.889,0.653,1.7747394301828897e-5,1,seurat_scdblfinder_soupx_emptydrops_test
-Palmd,3.5226017924918596e-8,-2.9955292959547744,0.063,0.45,2.874443062673357e-5,1,seurat_scdblfinder_soupx_emptydrops_test
-Zfhx4,5.1051196953897815e-8,-3.1825664408432597,0.063,0.45,4.165777671438061e-5,1,seurat_scdblfinder_soupx_emptydrops_test
-Hivep3,1.084182990397258e-7,1.201188370585219,0.841,0.569,8.846933201641624e-5,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpl5,1.1772272549514297e-7,-0.7313029567460045,0.921,0.975,9.606174400403664e-5,1,seurat_scdblfinder_soupx_emptydrops_test
-Eef1g,1.786598770639639e-7,-0.7372662809202932,0.952,0.975,1.457864596841945e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Serf2,2.663564986619849e-7,-0.7250608004239587,0.952,0.97,2.173469029081797e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Snhg14,3.12208952593818e-7,1.323997014536603,0.762,0.5,2.547625053165555e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpl17,8.356430928438799e-7,-0.5786514213929861,1,0.99,6.81884763760606e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Dok5,9.09793913750168e-7,-2.3009210940378626,0.175,0.515,7.42391833620137e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Mrpl57,9.127332296868948e-7,-1.4102163288063172,0.238,0.619,7.447903154245061e-4,1,seurat_scdblfinder_soupx_emptydrops_test
-Idi1,1.3567722128646604e-6,-3.613689189639749,0.032,0.347,0.00110712612569756,1,seurat_scdblfinder_soupx_emptydrops_test
-Sst,1.6809232940622712e-6,7.747020749709651,0.111,0,0.00137163340795481,1,seurat_scdblfinder_soupx_emptydrops_test
-Reln,3.1077474774006975e-6,4.524206055564425,0.238,0.05,0.00253592194155896,1,seurat_scdblfinder_soupx_emptydrops_test
-Iqsec1,3.454975673240004e-6,2.665501518682272,0.413,0.168,0.00281926014936384,1,seurat_scdblfinder_soupx_emptydrops_test
-Nbdy,5.007024079403737e-6,-1.5207023019177726,0.127,0.47,0.00408573164879344,1,seurat_scdblfinder_soupx_emptydrops_test
-Spats2l,6.0584383768863825e-6,2.201763722553319,0.349,0.114,0.00494368571553928,1,seurat_scdblfinder_soupx_emptydrops_test
-Gm4258,6.634353757826815e-6,1.0943174326595635,0.889,0.752,0.00541363266638668,1,seurat_scdblfinder_soupx_emptydrops_test
-Snu13,6.649893378416031e-6,-0.82529427086436,0.746,0.896,0.00542631299678748,1,seurat_scdblfinder_soupx_emptydrops_test
-Vps36,6.714937107915125e-6,-1.6097456016510447,0.143,0.475,0.00547938868005874,1,seurat_scdblfinder_soupx_emptydrops_test
-Gtf2a2,7.436327401929597e-6,-0.7113858635268822,0.683,0.881,0.00606804315997455,1,seurat_scdblfinder_soupx_emptydrops_test
-Hnrnpa1,1.07274925795792e-5,-0.5440542387327358,1,0.995,0.00875363394493662,1,seurat_scdblfinder_soupx_emptydrops_test
-2810013P06Rik,1.6616749098047242e-5,-1.9772799234999168,0.095,0.386,0.01355926726400654,1,seurat_scdblfinder_soupx_emptydrops_test
-Atp1b1,2.9322338100483345e-5,1.9317396627524128,0.508,0.287,0.0239270278899944,1,seurat_scdblfinder_soupx_emptydrops_test
-Rpsa,3.150286386037395e-5,-0.56217736055831,1,1,0.02570633691006514,1,seurat_scdblfinder_soupx_emptydrops_test
-Drg2,3.15078198049102e-5,-1.451518736771771,0.143,0.446,0.02571038096080672,1,seurat_scdblfinder_soupx_emptydrops_test
-1110012L19Rik,3.185295263631979e-5,-2.3190684407481217,0.063,0.327,0.02599200935123695,1,seurat_scdblfinder_soupx_emptydrops_test
-Fam216a,3.3483257293920264e-5,-1.297694789955555,0.159,0.475,0.02732233795183893,1,seurat_scdblfinder_soupx_emptydrops_test
-Rian,3.390386831646367e-5,1.704778301206246,0.508,0.267,0.02766555654623435,1,seurat_scdblfinder_soupx_emptydrops_test
-Snrpb2,3.730117149035007e-5,-0.8692655233086016,0.444,0.743,0.03043775593612566,1,seurat_scdblfinder_soupx_emptydrops_test
-Csad,3.803996291297152e-5,-1.807354922057604,0.095,0.371,0.03104060973698475,1,seurat_scdblfinder_soupx_emptydrops_test
-BC043934,5.567732675354313e-5,4.265894059973034,0.079,0,0.04543269863089119,1,seurat_scdblfinder_soupx_emptydrops_test
-Kif26b,6.006288363596465e-5,-3.515465653551625,0.063,0.312,0.04901131304694715,1,seurat_scdblfinder_soupx_emptydrops_test
-Fbn2,8.3193514941015e-14,1.8104007544926235,0.738,0.255,6.788590819186824e-11,2,seurat_scdblfinder_soupx_emptydrops_test
-Fabp3,1.865406274046567e-12,2.146944482894868,0.557,0.123,1.5221715196219984e-9,2,seurat_scdblfinder_soupx_emptydrops_test
-Mef2c,2.223728173703091e-12,1.7120126499889436,0.885,0.554,1.8145621897417222e-9,2,seurat_scdblfinder_soupx_emptydrops_test
-Ctxn1,5.912205415347416e-12,0.9984634197707212,0.951,0.838,4.824359618923491e-9,2,seurat_scdblfinder_soupx_emptydrops_test
-Dok5,1.0789870396289578e-11,2.1392077424294236,0.721,0.348,8.804534243372296e-9,2,seurat_scdblfinder_soupx_emptydrops_test
-Cdh13,1.3776817129882922e-8,1.2509079427441607,0.656,0.255,1.1241882777984464e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-Selenow,3.6337254880274594e-8,0.6404950129949207,1,0.985,2.9651199982304064e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-Tcf4,4.5269045570858256e-8,-0.6418553059328005,1,1,3.693954118582034e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-Tes,7.692474373871009e-8,2.549042926466213,0.279,0.044,6.277059089078743e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-Slc6a15,8.762246313991429e-8,1.6438406810104649,0.475,0.152,7.149992992217006e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-Plxna4,1.1962602816003026e-7,1.1861856798481587,0.82,0.711,9.761483897858468e-5,2,seurat_scdblfinder_soupx_emptydrops_test
-St3gal1,3.005021654099961e-7,2.3266505051297655,0.344,0.083,2.452097669745568e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Abr,3.737277419555147e-7,0.9209125665886836,0.836,0.451,3.0496183743569996e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Car11,5.601716493964087e-7,2.140237380898884,0.344,0.088,4.571000659074695e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Tead1,8.79360291389008e-7,-1.611948950206091,0.443,0.696,7.175579977734305e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Arhgap28,1.1514482646497885e-6,2.104258083793318,0.41,0.132,9.395817839542274e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Nexmif,1.202078782295092e-6,1.0978318146338848,0.721,0.377,9.80896286352795e-4,2,seurat_scdblfinder_soupx_emptydrops_test
-Slc6a6,1.818889795649932e-6,0.901166218415806,0.787,0.436,0.00148421407325034,2,seurat_scdblfinder_soupx_emptydrops_test
-Prkar2b,1.919690737910392e-6,0.9826961039124044,0.754,0.407,0.00156646764213488,2,seurat_scdblfinder_soupx_emptydrops_test
-Dpysl2,2.1638520606827724e-6,0.5490429264662136,1,0.936,0.00176570328151714,2,seurat_scdblfinder_soupx_emptydrops_test
-Grrp1,3.232464087461667e-6,2.741688004408609,0.213,0.034,0.00263769069536872,2,seurat_scdblfinder_soupx_emptydrops_test
-Bcat1,5.9714627331264245e-6,1.043068721891886,0.656,0.338,0.00487271359023116,2,seurat_scdblfinder_soupx_emptydrops_test
-Ltbp1,6.570667185146793e-6,-5.6158640002094735,0,0.27,0.00536166442307978,2,seurat_scdblfinder_soupx_emptydrops_test
-Trmt9b,8.852929051418046e-6,2.7416880044086094,0.213,0.039,0.00722399010595712,2,seurat_scdblfinder_soupx_emptydrops_test
-Syn1,1.274623301618826e-5,1.0896113078289162,0.525,0.221,0.01040092614120962,2,seurat_scdblfinder_soupx_emptydrops_test
-Vps36,1.7486000504275314e-5,0.9380852172121128,0.656,0.319,0.01426857641148865,2,seurat_scdblfinder_soupx_emptydrops_test
-Noct,1.9599559066855225e-5,1.3841359997905256,0.41,0.152,0.01599324019855386,2,seurat_scdblfinder_soupx_emptydrops_test
-Gad2,2.1930895136798986e-5,-3.539082765721993,0.033,0.299,0.01789561043162797,2,seurat_scdblfinder_soupx_emptydrops_test
-Necap1,2.4879688051774745e-5,1.1787518100174523,0.525,0.245,0.02030182545024819,2,seurat_scdblfinder_soupx_emptydrops_test
-Begain,3.5251100858508704e-5,1.6676874229648329,0.262,0.069,0.0287648983005431,2,seurat_scdblfinder_soupx_emptydrops_test
-Mrpl57,4.725361032949689e-5,0.8875388708720642,0.738,0.466,0.03855894602886946,2,seurat_scdblfinder_soupx_emptydrops_test
-Sema3c,6.507728846657119e-27,3.2816031513847848,0.825,0.173,5.3103067388722085e-24,0,seurat_scdblfinder_soupx_emptydrops_test
-Mef2c,5.6613092707234e-10,-2.8261705441017715,0.425,0.719,4.6196283649102945e-7,0,seurat_scdblfinder_soupx_emptydrops_test
-Lmo1,2.270124907870159e-9,1.740900357023104,0.662,0.33,1.85242192482205e-6,0,seurat_scdblfinder_soupx_emptydrops_test
-Tcf4,2.8985905737844413e-8,0.4560359342170255,1,1,2.365249908208104e-5,0,seurat_scdblfinder_soupx_emptydrops_test
-Myt1l,3.340939749235577e-8,0.8194052478780964,0.988,0.805,2.7262068353762308e-5,0,seurat_scdblfinder_soupx_emptydrops_test
-Fam114a2,4.1050400831766835e-8,1.2869899660999702,0.8,0.519,3.349712707872174e-5,0,seurat_scdblfinder_soupx_emptydrops_test
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-E330009J07Rik,2.2815139129544785e-7,1.4625723025976607,0.588,0.292,1.8617153529708544e-4,0,seurat_scdblfinder_soupx_emptydrops_test
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diff --git a/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test.rds b/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test.rds
index 2de8ec6..05846d3 100644
Binary files a/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test.rds and b/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test.rds differ
diff --git a/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test_markergenes.csv b/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test_markergenes.csv
index 8574663..e4a4429 100644
--- a/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test_markergenes.csv
+++ b/tests/reference_outputs/testdata/results/soupx/seurat_soupx_emptydrops_test_markergenes.csv
@@ -1,188 +1,185 @@
 genesymbol,p_val,avg_log2FC,pct.1,pct.2,p_val_adj,cluster,workflow
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-Slco1c1,9.509799721698484e-27,5.586107042662097,0.55,0.014,7.759996572905962e-24,3,seurat_soupx_emptydrops_test
-Pax6,1.3577496189250016e-19,3.634851376513516,0.617,0.091,1.1079236890428012e-16,3,seurat_soupx_emptydrops_test
-Ube2c,5.8152193734469055e-18,5.145759784355979,0.467,0.038,4.745219008732676e-15,3,seurat_soupx_emptydrops_test
-Rdm1,1.63202027803434e-17,4.540783052152607,0.417,0.024,1.3317285468760215e-14,3,seurat_soupx_emptydrops_test
-Nde1,2.880556917424557e-17,4.437405312307298,0.483,0.053,2.3505344446184393e-14,3,seurat_soupx_emptydrops_test
-Elk3,9.177879169719409e-16,4.700439718141092,0.367,0.019,7.489149402491039e-13,3,seurat_soupx_emptydrops_test
-Mt2,1.1128053765675195e-15,4.747745432919449,0.333,0.01,9.08049187279096e-13,3,seurat_soupx_emptydrops_test
-Cenpn,4.317577686267794e-15,5.837943241891026,0.3,0.005,3.52314339199452e-12,3,seurat_soupx_emptydrops_test
-Phactr1,5.125732402076687e-15,-1.657340759838921,0.667,0.976,4.182597640094577e-12,3,seurat_soupx_emptydrops_test
-Rpl13,1.2730758114550084e-14,0.6571514362782276,1,1,1.0388298621472868e-11,3,seurat_soupx_emptydrops_test
-Fnbp1l,6.688299950001201e-14,-1.398868239358385,0.733,0.976,5.4576527592009796e-11,3,seurat_soupx_emptydrops_test
-Hes1,2.389010174345318e-13,6.185866545311334,0.267,0.005,1.9494323022657792e-10,3,seurat_soupx_emptydrops_test
-Psrc1,4.3527934664609353e-13,3.9090263399525096,0.333,0.024,3.5518794686321227e-10,3,seurat_soupx_emptydrops_test
-Ctxn1,7.815305948314607e-13,-1.453463265576878,0.667,0.923,6.377289653824718e-10,3,seurat_soupx_emptydrops_test
-Sgo2a,2.235858518861152e-12,4.90902633995251,0.267,0.01,1.8244605513906994e-9,3,seurat_soupx_emptydrops_test
-Tpbg,2.5597787532813305e-12,4.2265085298086795,0.3,0.019,2.088779462677566e-9,3,seurat_soupx_emptydrops_test
-Serf2,3.1759324900773013e-12,0.8895509424099273,0.983,0.962,2.5915609119030773e-9,3,seurat_soupx_emptydrops_test
-Rpl26,3.5256523123823818e-12,0.6553518286125541,1,0.995,2.8769322869040242e-9,3,seurat_soupx_emptydrops_test
-Plxna4,1.1599507975324837e-11,-2.513879402659674,0.433,0.827,9.465198507865066e-9,3,seurat_soupx_emptydrops_test
-Ccnd1,1.48093311547947e-11,4.317111078589586,0.3,0.024,1.2084414222312476e-8,3,seurat_soupx_emptydrops_test
-Fancd2,1.5988811788226532e-11,4.668018240448714,0.25,0.01,1.3046870419192851e-8,3,seurat_soupx_emptydrops_test
-Mef2c,6.47314819486307e-11,-3.505876973859941,0.333,0.716,5.282088927008266e-8,3,seurat_soupx_emptydrops_test
-Dpysl2,7.807268060314073e-11,-1.0125251114330391,0.85,0.981,6.370730737216283e-8,3,seurat_soupx_emptydrops_test
-Ltbp1,9.849279535719152e-11,2.415037499278844,0.5,0.12,8.037012101146828e-8,3,seurat_soupx_emptydrops_test
-Dlgap5,1.1548316388584528e-10,4.516015147003665,0.25,0.014,9.423426173084977e-8,3,seurat_soupx_emptydrops_test
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-Nyap2,3.1092378826936913e-10,-4.239873879004877,0.05,0.505,2.537138112278052e-7,3,seurat_soupx_emptydrops_test
-Gypc,3.1617595062799086e-10,5.600904044590177,0.183,0,2.579995757124405e-7,3,seurat_soupx_emptydrops_test
-Gprc5b,3.613893767469123e-10,2.582045017338862,0.433,0.096,2.948937314254805e-7,3,seurat_soupx_emptydrops_test
-Rpsa,4.199981881062491e-10,0.7496152663909412,1,1,3.427185214946993e-7,3,seurat_soupx_emptydrops_test
-Sept9,4.292683433577656e-10,1.9310526462825088,0.617,0.221,3.502829681799367e-7,3,seurat_soupx_emptydrops_test
-Usp22,7.765269325286487e-10,-1.215439660694681,0.683,0.87,6.336459769433774e-7,3,seurat_soupx_emptydrops_test
-Tcf7l1,2.5044284026103902e-9,3.6009040445901777,0.267,0.029,2.0436135765300782e-6,3,seurat_soupx_emptydrops_test
-Cenpu,2.6025404242509844e-9,3.571156701196126,0.267,0.029,2.1236729861888034e-6,3,seurat_soupx_emptydrops_test
-Nexmif,3.995013978556859e-9,-2.6506694021582167,0.117,0.558,3.2599314065023965e-6,3,seurat_soupx_emptydrops_test
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-Cep170,5.502259218678353e-9,-1.3903691509892386,0.567,0.837,4.489843522441536e-6,3,seurat_soupx_emptydrops_test
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-Zfp704,6.273636729594159e-9,-1.3532922657966977,0.45,0.793,5.119287571348834e-6,3,seurat_soupx_emptydrops_test
-Ptgfrn,7.488445948583565e-9,2.5553893853378096,0.367,0.077,6.110571894044189e-6,3,seurat_soupx_emptydrops_test
-Hivep3,7.624420536867289e-9,-1.7770294600259269,0.3,0.731,6.221527158083707e-6,3,seurat_soupx_emptydrops_test
-Tmeff1,1.1049665778046334e-8,-1.2628333473649451,0.567,0.865,9.016527274885808e-6,3,seurat_soupx_emptydrops_test
-Jakmip2,1.3610333923058443e-8,-1.8897154518003865,0.333,0.692,1.1106032481215691e-5,3,seurat_soupx_emptydrops_test
-Ccnf,2.8422648106623107e-8,4.651530117660146,0.2,0.014,2.3192880855004457e-5,3,seurat_soupx_emptydrops_test
-Prkar2b,5.0960525863126566e-8,-2.3059865510183406,0.2,0.572,4.158378910431128e-5,3,seurat_soupx_emptydrops_test
-Rpl19,5.854506655486286e-8,0.5096106135264726,1,1,4.7772774308768094e-5,3,seurat_soupx_emptydrops_test
-Sash1,1.5489635319494365e-7,2.793549122532574,0.267,0.043,1.2639542420707402e-4,3,seurat_soupx_emptydrops_test
-Srebf1,1.5886733479733658e-7,2.4886945410041528,0.35,0.087,1.2963574519462662e-4,3,seurat_soupx_emptydrops_test
-Klhl13,1.6218157684503537e-7,1.6106850653827631,0.367,0.091,1.3234016670554883e-4,3,seurat_soupx_emptydrops_test
-Shisa2,2.230063917330262e-7,2.893084796083488,0.2,0.019,1.8197321565414936e-4,3,seurat_soupx_emptydrops_test
-Cdca5,2.427078854740491e-7,3.8810119637829135,0.167,0.01,1.9804963454682405e-4,3,seurat_soupx_emptydrops_test
-C030005K06Rik,6.403487455716082e-7,5.881011963782912,0.117,0,5.225245763864323e-4,3,seurat_soupx_emptydrops_test
-Mrpl39,8.426973969211655e-7,1.4012316997538137,0.567,0.24,6.87641075887671e-4,3,seurat_soupx_emptydrops_test
-Gins2,9.74887974894938e-7,3.559083868895551,0.183,0.019,7.955085875142695e-4,3,seurat_soupx_emptydrops_test
-Cdh13,1.0991471083669395e-6,-3.9434164716336326,0.1,0.428,8.969040404274228e-4,3,seurat_soupx_emptydrops_test
-Iqgap3,1.1290160296859033e-6,4.700439718141092,0.133,0.005,9.212770802236972e-4,3,seurat_soupx_emptydrops_test
-Tead1,1.4219470958753475e-6,1.1182401197151637,0.85,0.577,0.00116030883023428,3,seurat_soupx_emptydrops_test
-Nsl1,1.8234048243027771e-6,2.9310526462825086,0.15,0.01,0.00148789833663106,3,seurat_soupx_emptydrops_test
-Ostm1,1.9210275771170717e-6,2.006542845866772,0.433,0.163,0.00156755850292753,3,seurat_soupx_emptydrops_test
-Pdzd11,2.1457118867744293e-6,1.2334612904504467,0.683,0.365,0.00175090089960793,3,seurat_soupx_emptydrops_test
-Hnrnpa1,3.766608374714695e-6,0.5059201783619569,1,0.995,0.00307355243376719,3,seurat_soupx_emptydrops_test
-Tgfbr2,4.226066992087012e-6,5.378511623253729,0.1,0,0.003448470665543,3,seurat_soupx_emptydrops_test
-Gabbr1,4.361037837715681e-6,-1.3172966461557167,0.45,0.697,0.00355860687557599,3,seurat_soupx_emptydrops_test
-Anxa5,5.300121839567564e-6,2.719548541088797,0.217,0.038,0.00432489942108713,3,seurat_soupx_emptydrops_test
-Rpl17,5.792590720493046e-6,0.4796756053766691,1,0.99,0.00472675402792232,3,seurat_soupx_emptydrops_test
-Selenow,6.876528617624089e-6,-0.6137704635854337,1,0.986,0.00561124735198125,3,seurat_soupx_emptydrops_test
-Idi1,7.014982641585781e-6,2.700439718141092,0.45,0.216,0.00572422583553399,3,seurat_soupx_emptydrops_test
-Eepd1,7.188132581474043e-6,2.915539646911184,0.267,0.067,0.00586551618648281,3,seurat_soupx_emptydrops_test
-Dync2li1,8.71331907367487e-6,2.0092778135880107,0.367,0.13,0.00711006836411869,3,seurat_soupx_emptydrops_test
-Rtkn,8.903233989545141e-6,3.3785116232537296,0.133,0.01,0.00726503893546883,3,seurat_soupx_emptydrops_test
-Tom1l1,9.437904619896511e-6,2.623624121090261,0.2,0.034,0.00770133016983555,3,seurat_soupx_emptydrops_test
-Fadd,1.0301430777629514e-5,2.2410080995037953,0.233,0.048,0.00840596751454568,3,seurat_soupx_emptydrops_test
-Kdm5b,1.1789110612324144e-5,-0.794342709227254,0.65,0.861,0.0096199142596565,3,seurat_soupx_emptydrops_test
-Fabp3,1.3315950844663892e-5,-3.615841813605128,0.017,0.284,0.01086581588924573,3,seurat_soupx_emptydrops_test
-Syn1,1.6886060435986362e-5,-2.5283789723547887,0.067,0.351,0.01377902531576487,3,seurat_soupx_emptydrops_test
-Eef1g,2.0357020615806427e-5,0.4780472968046443,0.983,0.962,0.01661132882249804,3,seurat_soupx_emptydrops_test
-Scnm1,2.039931472434914e-5,0.9424125084470564,0.65,0.327,0.0166458408150689,3,seurat_soupx_emptydrops_test
-Rplp2,2.1852317032858916e-5,0.45629274416412313,1,0.995,0.01783149069881287,3,seurat_soupx_emptydrops_test
-Mastl,2.245802388670719e-5,2.793549122532573,0.167,0.024,0.01832574749155307,3,seurat_soupx_emptydrops_test
-Calm2,2.5220723172603648e-5,-0.44444015385489255,0.95,0.995,0.02058011010884457,3,seurat_soupx_emptydrops_test
-Prmt2,2.5514734765346545e-5,-1.1646307017727993,0.417,0.663,0.02082002356852278,3,seurat_soupx_emptydrops_test
-Gsx2,2.780701528542765e-5,4.600904044590177,0.083,0,0.02269052447290896,3,seurat_soupx_emptydrops_test
-Rhcg,2.7815760670540036e-5,5.115477217419936,0.083,0,0.02269766070716067,3,seurat_soupx_emptydrops_test
-Rabl3,3.130220801892212e-5,2.098403704060994,0.25,0.062,0.02554260174344045,3,seurat_soupx_emptydrops_test
-Rpl5,3.513887052838923e-5,0.5213572453726814,1,0.952,0.02867331835116561,3,seurat_soupx_emptydrops_test
-Nhp2,3.528557162546589e-5,1.0115497747518636,0.683,0.457,0.02879302644638017,3,seurat_soupx_emptydrops_test
-Fau,3.5413092714348075e-5,0.34140830205284756,1,1,0.02889708365490802,3,seurat_soupx_emptydrops_test
-Mybl2,4.319502446544895e-5,3.1720607457863035,0.133,0.014,0.03524713996380634,3,seurat_soupx_emptydrops_test
-Mmd2,4.4349020116513176e-5,1.22266180702314,0.633,0.351,0.03618880041507475,3,seurat_soupx_emptydrops_test
-Adamts2,4.6429132274323106e-5,-5.406123222303791,0,0.231,0.03788617193584765,3,seurat_soupx_emptydrops_test
-Rab28,4.7478520839527074e-5,1.0305883198334231,0.617,0.337,0.03874247300505409,3,seurat_soupx_emptydrops_test
-Mamld1,5.166331487212361e-5,1.6560455987826386,0.267,0.072,0.04215726493565287,3,seurat_soupx_emptydrops_test
-Trim35,5.6542689579556395e-5,-0.8565084064104674,0.7,0.817,0.04613883469691802,3,seurat_soupx_emptydrops_test
-Sema3c,5.88750277202224e-5,-1.96895156374077,0.15,0.433,0.04804202261970148,3,seurat_soupx_emptydrops_test
-Fbn2,3.5788941445460483e-16,1.9575166686784864,0.766,0.25,2.920377621949575e-13,1,seurat_soupx_emptydrops_test
-Mef2c,2.4801737866331942e-14,1.9077237475048807,0.891,0.549,2.0238218098926864e-11,1,seurat_soupx_emptydrops_test
-Dok5,2.1988750714172906e-13,2.184979347164602,0.75,0.343,1.7942820582765088e-10,1,seurat_soupx_emptydrops_test
-Fabp3,3.003799603338037e-12,2.1068281661172708,0.547,0.123,2.451100476323838e-9,1,seurat_soupx_emptydrops_test
-Ctxn1,1.156627944053016e-11,0.9803413464861336,0.938,0.843,9.438084023472612e-9,1,seurat_soupx_emptydrops_test
-Cdh13,2.246549582167099e-9,1.235420722637441,0.672,0.255,1.8331844590483528e-6,1,seurat_soupx_emptydrops_test
-Slc6a15,1.6835126906229322e-8,1.6724253419714954,0.484,0.147,1.3737463555483128e-5,1,seurat_soupx_emptydrops_test
-Dpysl2,6.658911466109675e-8,0.6063361515137231,1,0.936,5.433671756345495e-5,1,seurat_soupx_emptydrops_test
-Tcf4,8.441570919915126e-8,-0.6095808201583504,1,1,6.888321870650741e-5,1,seurat_soupx_emptydrops_test
-Prkar2b,1.00180751911626e-7,1.0969231704994056,0.781,0.397,8.174749355988681e-5,1,seurat_soupx_emptydrops_test
-Car11,1.5348999090992236e-7,2.3046935574710083,0.344,0.083,1.2524783258249664e-4,1,seurat_soupx_emptydrops_test
-Plxna4,1.835165953984403e-7,1.1783466445483448,0.812,0.716,1.4974954184512727e-4,1,seurat_soupx_emptydrops_test
-Tes,5.723949704772728e-7,2.3643030466091637,0.266,0.049,4.670742959094546e-4,1,seurat_soupx_emptydrops_test
-Paqr9,8.169307844917722e-7,3.0509369652252256,0.188,0.02,6.666155201452862e-4,1,seurat_soupx_emptydrops_test
-Selenow,9.408660224273744e-7,0.5793159375800143,1,0.985,7.677466743007375e-4,1,seurat_soupx_emptydrops_test
-Tead1,1.2247341419950896e-6,-1.494353104153953,0.438,0.701,9.993830598679931e-4,1,seurat_soupx_emptydrops_test
-Nexmif,1.7697972831571229e-6,1.038553240769393,0.719,0.377,0.00144415458305621,1,seurat_soupx_emptydrops_test
-Abr,2.197731578623755e-6,0.8926914621995558,0.812,0.461,0.00179334896815698,1,seurat_soupx_emptydrops_test
-Gad2,2.5873441556973647e-6,-4.626782676415783,0.016,0.304,0.00211127283104904,1,seurat_soupx_emptydrops_test
-Arhgap28,3.585108870299838e-6,2.034995421356204,0.391,0.132,0.00292544883816466,1,seurat_soupx_emptydrops_test
-Ltbp1,4.006798587736618e-6,-5.685126662646588,0,0.27,0.00326954764759308,1,seurat_soupx_emptydrops_test
-Trmt9b,4.551128311653843e-6,2.7197310567498523,0.219,0.039,0.00371372070230953,1,seurat_soupx_emptydrops_test
-Phactr1,5.477191419181669e-6,0.7297430196016612,1,0.877,0.00446938819805224,1,seurat_soupx_emptydrops_test
-St3gal1,6.928266767148685e-6,2.0986900966735935,0.312,0.088,0.00565346568199332,1,seurat_soupx_emptydrops_test
-Insm1,7.045136475556029e-6,-1.96361134334393,0.391,0.623,0.00574883136405372,1,seurat_soupx_emptydrops_test
-Bcat1,7.568493329381265e-6,1.0142138592197008,0.656,0.343,0.00617589055677511,1,seurat_soupx_emptydrops_test
-Noct,1.127524668525973e-5,1.367570760443075,0.422,0.157,0.00920060129517194,1,seurat_soupx_emptydrops_test
-Slc6a6,1.2048789431370904e-5,0.8319035559786923,0.75,0.436,0.00983181217599865,1,seurat_soupx_emptydrops_test
-Myt1l,1.3287372316930436e-5,0.538591784912263,1,0.819,0.01084249581061523,1,seurat_soupx_emptydrops_test
-Kif26b,2.1834202940618582e-5,1.287135186086704,0.453,0.191,0.01781670959954476,1,seurat_soupx_emptydrops_test
-Csmd2,3.1822100377166114e-5,1.1950159824051427,0.734,0.505,0.02596683390776755,1,seurat_soupx_emptydrops_test
-Prmt2,3.707495317239488e-5,0.7700361385979179,0.812,0.544,0.03025316178867422,1,seurat_soupx_emptydrops_test
-Fam174b,4.019019855263487e-5,1.3870231231092474,0.375,0.137,0.03279520201895005,1,seurat_soupx_emptydrops_test
-Pax6,6.079475820103684e-5,-3.658491536143121,0.031,0.265,0.04960852269204606,1,seurat_soupx_emptydrops_test
-Gad2,1.6786746575267035e-27,4.564942836878265,0.721,0.092,1.36979852054179e-24,2,seurat_soupx_emptydrops_test
-Cntnap5c,1.154448006801316e-16,4.051510850888602,0.475,0.053,9.420295735498739e-14,2,seurat_soupx_emptydrops_test
-Tox2,4.608125961451531e-13,4.7627496199364385,0.311,0.019,3.7602307845444485e-10,2,seurat_soupx_emptydrops_test
-Hsp90ab1,2.592448954344172e-11,-0.8121320223968236,1,1,2.1154383467448445e-8,2,seurat_soupx_emptydrops_test
-Rpl13,9.78425651002178e-11,-0.6431895734059578,1,1,7.983953312177772e-8,2,seurat_soupx_emptydrops_test
-Mmd2,3.1148390379441607e-10,-3.389897390074038,0.049,0.522,2.5417086549624354e-7,2,seurat_soupx_emptydrops_test
-Mef2c,1.6583450617948414e-9,1.0547475087587537,0.951,0.536,1.3532095704245907e-6,2,seurat_soupx_emptydrops_test
-Zfp704,5.3787209526146535e-9,1.394868186035798,0.902,0.662,4.389036297333557e-6,2,seurat_soupx_emptydrops_test
-Rplp2,1.2662797540344532e-8,-0.6886842847371772,1,0.995,1.033284279292114e-5,2,seurat_soupx_emptydrops_test
-Sema3c,2.129562098627735e-8,-3.881106569838286,0.066,0.459,1.7377226724802317e-5,2,seurat_soupx_emptydrops_test
-Insm1,2.7369452777411e-8,-2.2496341045193935,0.295,0.647,2.2333473466367377e-5,2,seurat_soupx_emptydrops_test
-Rpl19,3.625547173117309e-8,-0.5722346277763699,1,1,2.9584464932637237e-5,2,seurat_soupx_emptydrops_test
-Lmo1,6.072602657887616e-8,-2.3768017324623547,0.131,0.517,4.955243768836293e-5,2,seurat_soupx_emptydrops_test
-Palmd,6.517579464925215e-8,-2.9534574140629695,0.066,0.449,5.318344843378976e-5,2,seurat_soupx_emptydrops_test
-Dok5,1.2435431220968613e-7,-2.5161097530590375,0.148,0.527,1.0147311876310388e-4,2,seurat_soupx_emptydrops_test
-Zfhx4,1.279366950953929e-7,-3.1062443679135514,0.066,0.444,1.043963431978406e-4,2,seurat_soupx_emptydrops_test
-Rpl26,1.402125772577781e-7,-0.5222934068311145,1,0.995,1.1441346304234691e-4,2,seurat_soupx_emptydrops_test
-Gtf2a2,2.429320404431004e-7,-0.8606870285993531,0.672,0.879,1.9823254500156992e-4,2,seurat_soupx_emptydrops_test
-Eef1g,2.922693278511529e-7,-0.738206905527407,0.951,0.971,2.3849177152654075e-4,2,seurat_soupx_emptydrops_test
-Rpl5,4.30091373377769e-7,-0.6983412226225485,0.934,0.971,3.509545606762595e-4,2,seurat_soupx_emptydrops_test
-Sst,8.411263505726009e-7,7.785117432964894,0.115,0,6.863591020672423e-4,2,seurat_soupx_emptydrops_test
-Spats2l,1.9090885988857656e-6,2.2835817832378797,0.361,0.111,0.00155781629669078,2,seurat_soupx_emptydrops_test
-Hivep3,2.5360850900025683e-6,1.0272061008394309,0.836,0.575,0.00206944543344209,2,seurat_soupx_emptydrops_test
-Serf2,3.061668283507151e-6,-0.6707210187556794,0.967,0.966,0.00249832131934183,2,seurat_soupx_emptydrops_test
-Idi1,3.155472995282589e-6,-3.5318711289551885,0.033,0.338,0.00257486596415059,2,seurat_soupx_emptydrops_test
-Iqsec1,4.239809704503547e-6,2.7013490752722955,0.41,0.169,0.00345968471887489,2,seurat_soupx_emptydrops_test
-Nbdy,9.506904055862388e-6,-1.4699111368538365,0.131,0.469,0.0077576337095837,2,seurat_soupx_emptydrops_test
-Snhg14,9.716666052044376e-6,1.1988487347431125,0.738,0.507,0.00792879949846821,2,seurat_soupx_emptydrops_test
-Mrpl57,1.2752691166852956e-5,-1.2596181930920156,0.262,0.599,0.01040619599215201,2,seurat_soupx_emptydrops_test
-Reln,1.4593330700615544e-5,3.882488864210534,0.23,0.053,0.01190815785170228,2,seurat_soupx_emptydrops_test
-Hnrnpa1,1.560817407981843e-5,-0.544830695990957,1,0.995,0.01273627004913184,2,seurat_soupx_emptydrops_test
-Hspb11,2.140062172350864e-5,-1.4467037456925111,0.082,0.396,0.01746290732638305,2,seurat_soupx_emptydrops_test
-Nhp2,2.189803922966096e-5,-1.2889124998860535,0.262,0.58,0.01786880001140334,2,seurat_soupx_emptydrops_test
-Atp1b1,2.2581262669209997e-5,1.6142270952263509,0.525,0.29,0.01842631033807535,2,seurat_soupx_emptydrops_test
-Rian,2.488928031342315e-5,1.7865963618908065,0.508,0.266,0.02030965273575329,2,seurat_soupx_emptydrops_test
-Kif26b,2.6990600393035236e-5,-3.804934889352882,0.049,0.314,0.02202432992071675,2,seurat_soupx_emptydrops_test
-Vps36,2.718407619720132e-5,-1.4283918674155696,0.148,0.469,0.02218220617691627,2,seurat_soupx_emptydrops_test
-Scnm1,2.9930081979286813e-5,-1.3303597844550428,0.164,0.469,0.02442294689509804,2,seurat_soupx_emptydrops_test
-BC043934,3.3820329516888146e-5,4.3477121206575955,0.082,0,0.02759738888578072,2,seurat_soupx_emptydrops_test
-2810013P06Rik,4.068976186457581e-5,-1.9096757220350569,0.098,0.377,0.03320284568149386,2,seurat_soupx_emptydrops_test
-Rpl17,4.24169307190614e-5,-0.4798206833376395,1,0.99,0.0346122154667541,2,seurat_soupx_emptydrops_test
-Snu13,4.560025360539507e-5,-0.7471114255439988,0.77,0.889,0.03720980694200238,2,seurat_soupx_emptydrops_test
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diff --git a/workflow/scripts/emptydrops.R b/workflow/scripts/emptydrops.R
index fb9d331..c28b981 100644
--- a/workflow/scripts/emptydrops.R
+++ b/workflow/scripts/emptydrops.R
@@ -36,7 +36,7 @@ colnames(droputil_rawdata) <- droputil_rawdata$Barcode
 rownames(droputil_rawdata) <- make.unique(rowData(droputil_rawdata)$Symbol)
 set.seed(WORKFLOW_SEED)
 dropletutils_out <-emptyDrops(counts(droputil_rawdata))
-is.cell <-!is.na(dropletutils_out$FDR) & dropletutils_out$FDR<0.01
+is.cell <-!is.na(dropletutils_out$FDR) & dropletutils_out$FDR<0.001
 cell_barcodes <- colnames(droputil_rawdata)[which(is.cell)]
 droputil_filtered <- droputil_rawdata[,is.cell]
 droputil_filtered <- logNormCounts(droputil_filtered)