diff --git a/.dockerignore b/.dockerignore
new file mode 100644
index 0000000..0f137ba
--- /dev/null
+++ b/.dockerignore
@@ -0,0 +1,28 @@
+.git
+.github
+.venv
+__pycache__
+**/__pycache__
+**/*.pyc
+**/*.pyo
+.pytest_cache
+.mypy_cache
+.ruff_cache
+.lancedb
+*.duckdb
+.env
+.env.*
+.envrc
+chart/
+docs/
+eval/
+tree/
+*.md
+!README.md
+.claude
+.ai
+.cursor
+agent-transcripts
+terminals
+uv.lock
+Makefile
diff --git a/.gitignore b/.gitignore
index 06c74d2..6a538d5 100644
--- a/.gitignore
+++ b/.gitignore
@@ -8,6 +8,7 @@
*.duckdb
*.lance
.lancedb/
+.cache/
__pycache__*
.venv
diff --git a/Dockerfile b/Dockerfile
new file mode 100644
index 0000000..0201962
--- /dev/null
+++ b/Dockerfile
@@ -0,0 +1,59 @@
+# syntax=docker/dockerfile:1.7
+FROM ghcr.io/astral-sh/uv:python3.12-bookworm-slim AS builder
+
+WORKDIR /build
+
+ENV UV_COMPILE_BYTECODE=1 \
+ UV_LINK_MODE=copy \
+ UV_PYTHON_DOWNLOADS=0 \
+ PIP_DISABLE_PIP_VERSION_CHECK=1
+
+RUN uv venv /opt/venv
+ENV PATH="/opt/venv/bin:$PATH"
+
+RUN --mount=type=cache,target=/root/.cache/uv \
+ uv pip install \
+ "mcp[cli]>=1.6" \
+ "qdrant-client>=1.12" \
+ "fastembed>=0.4" \
+ "onnxruntime<1.24"
+
+COPY kb/__init__.py kb/config.py kb/embed.py /build/kb/
+COPY kb/adapters/ /build/kb/adapters/
+COPY kb/mcp_retrieval/ /build/kb/mcp_retrieval/
+
+ENV FASTEMBED_CACHE_PATH=/opt/fastembed \
+ HOME=/tmp \
+ PYTHONPATH=/build
+RUN mkdir -p /opt/fastembed \
+ && python -c "from fastembed import TextEmbedding; TextEmbedding(model_name='BAAI/bge-small-en-v1.5')"
+
+FROM python:3.12-slim-bookworm AS runtime
+
+RUN apt-get update \
+ && apt-get install -y --no-install-recommends libgomp1 \
+ && rm -rf /var/lib/apt/lists/* \
+ && groupadd --gid 1000 mcp \
+ && useradd --uid 1000 --gid mcp --create-home --home-dir /home/mcp mcp
+
+# Ownership via COPY --chown avoids a recursive chown/chmod metadata layer that
+# stalls Colima's containerd unpack on large onnxruntime/fastembed trees.
+# /opt/venv stays root-owned; pip installs are world-readable (a+rX) so uid 1000 works.
+COPY --from=builder /opt/venv /opt/venv
+COPY --from=builder --chown=1000:1000 /build/kb /app/kb
+COPY --from=builder --chown=1000:1000 /opt/fastembed /opt/fastembed
+
+ENV PATH="/opt/venv/bin:$PATH" \
+ PYTHONPATH=/app \
+ PYTHONUNBUFFERED=1 \
+ PYTHONDONTWRITEBYTECODE=1 \
+ HOME=/home/mcp \
+ FASTEMBED_CACHE_PATH=/opt/fastembed \
+ QDRANT_NETWORK=internal
+
+WORKDIR /app
+USER 1000:1000
+
+# stdio by default, override with --transport streamable-http for HTTP.
+ENTRYPOINT ["python", "-m", "kb.mcp_retrieval"]
+CMD []
diff --git a/Makefile b/Makefile
index 1554a9f..b73400e 100644
--- a/Makefile
+++ b/Makefile
@@ -1,12 +1,22 @@
PY := uv run python
+# kb-retrieval MCP image (must match chart/values.yaml image.* unless overridden)
+IMAGE_REPO ?= ghcr.io/teaglebuilt/kb-retrieval
+IMAGE_TAG ?= 0.1.0
+IMAGE ?= $(IMAGE_REPO):$(IMAGE_TAG)
+GHCR_HOST ?= ghcr.io
+GHCR_SCOPES ?= write:packages,read:packages
+DOCKER_BUILDKIT ?= 1
+BUILDKIT_PROGRESS ?= plain
+
.DEFAULT_GOAL := help
-.PHONY: help install extract ingest reindex index query sync qdrant-forward golden clean \
+.PHONY: help install extract ingest reindex index query sync mcp-retrieval golden clean \
+ docker-build docker-login docker-push helm-deploy mcp-image \
secrets-status secrets-encrypt secrets-decrypt secrets-check secrets-config secrets-hooks
help:
@grep -E '^[a-zA-Z_-]+:.*?## .*$$' $(MAKEFILE_LIST) | \
- awk 'BEGIN {FS = ":.*?## "}; {printf " \033[36m%-16s\033[0m %s\n", $$1, $$2}'
+ awk 'BEGIN {FS = ":.*?## "}; {printf " \033[36m%-18s\033[0m %s\n", $$1, $$2}'
install:
uv sync
@@ -28,6 +38,32 @@ query: ## Query the local index: make query Q="ebpf network policy"
sync: ## Push local LanceDB vectors -> Qdrant on the k8s cluster
$(PY) -m kb sync
+mcp-retrieval: ## Run kb_search MCP (stdio). QDRANT_NETWORK=internal|external
+ $(PY) -m kb.mcp_retrieval --transport stdio
+
+docker-build: ## Build kb-retrieval MCP image (bakes bge-small FastEmbed weights)
+ DOCKER_BUILDKIT=$(DOCKER_BUILDKIT) BUILDKIT_PROGRESS=$(BUILDKIT_PROGRESS) \
+ docker build -t $(IMAGE) -f Dockerfile .
+
+docker-login: ## Login to GHCR using gh auth token (write:packages)
+ @command -v gh >/dev/null || { echo "gh CLI required (https://cli.github.com)"; exit 1; }
+ @gh auth status -h github.com >/dev/null 2>&1 || { echo "run: gh auth login"; exit 1; }
+ @gh auth status -h github.com 2>&1 | grep -q 'write:packages' || \
+ gh auth refresh -h github.com -s $(GHCR_SCOPES)
+ @TOKEN=$$(gh auth token); \
+ echo "$$TOKEN" | docker login $(GHCR_HOST) -u "$$(gh api user --jq .login)" --password-stdin
+
+docker-push: docker-build docker-login ## Push kb-retrieval image to IMAGE_REPO
+ docker push $(IMAGE)
+
+helm-deploy: ## Install/upgrade chart; qdrant.apikey from QDRANT_API_KEY (.envrc)
+ @test -n "$${QDRANT_API_KEY}" || { \
+ echo "QDRANT_API_KEY not set — run: direnv allow (or export from .envrc)"; \
+ exit 1; \
+ }
+ helm upgrade --install knowledge-tree chart -n ai \
+ --set-string qdrant.apikey="$${QDRANT_API_KEY}"
+
golden: ## Measure retrieval quality (recall@k / MRR) against eval/golden.yaml
$(PY) -m kb eval
diff --git a/chart/.helmignore b/chart/.helmignore
new file mode 100644
index 0000000..10f6927
--- /dev/null
+++ b/chart/.helmignore
@@ -0,0 +1,8 @@
+# Patterns to ignore when packaging the chart.
+*.md
+.git
+.gitignore
+.DS_Store
+*.tgz
+*.bak
+*.tmp
diff --git a/chart/Chart.yaml b/chart/Chart.yaml
new file mode 100644
index 0000000..5f7cc10
--- /dev/null
+++ b/chart/Chart.yaml
@@ -0,0 +1,7 @@
+---
+apiVersion: v2
+name: knowledge-tree
+description: Knowledge-tree read plane (kb-retrieval MCP + knowledge-scout agent)
+type: application
+version: '1.0.0'
+appVersion: '0.1.0'
\ No newline at end of file
diff --git a/chart/templates/agent.yaml b/chart/templates/agent.yaml
new file mode 100644
index 0000000..81b3519
--- /dev/null
+++ b/chart/templates/agent.yaml
@@ -0,0 +1,139 @@
+---
+apiVersion: kagent.dev/v1alpha2
+kind: Agent
+metadata:
+ name: knowledge-scout
+ namespace: ai
+ labels:
+ app.kubernetes.io/name: knowledge-scout
+ app.kubernetes.io/part-of: knowledge
+spec:
+ description: >-
+ Research agent that finds gaps in the knowledge tree via kb_search,
+ scouts fresh external sources, and proposes citeable content for tree/
+ declarative:
+ runtime: go
+ modelConfig: llmd-vllm-config
+ promptTemplate:
+ dataSources:
+ - alias: builtin
+ kind: ConfigMap
+ name: kagent-builtin-prompts
+ systemMessage: |
+ # Knowledge Scout
+
+ You research **new content to add to the knowledge tree** (`tree/…`).
+ You are not a general chatbot. Every run ends with structured proposals
+ grounded in (a) what the tree already has and (b) fresh external signals.
+
+ ## Role
+ Ai platform engineer who curates a git-backed knowledge vault
+ for storing content which will be used for context for ai agents.
+ Prefer lab-proven, citeable material over hype.
+
+ ## Tools (use in this order)
+ 1. `kb_search` — semantic search over the existing `knowledge` collection
+ (paths under `tree/…`, headings, tags, chunk text). **Always first.**
+ 2. `datetime_get_current_time` — freshness window (last 1–2 weeks).
+ 3. Firecrawl — web/YouTube/Reddit/HN/blogs; papers; GitHub research.
+ 4. `shell` — light local checks only when needed (never cluster mutate).
+ 5. `qdrant-find` / `qdrant-store` — optional staging of approved ideas
+ in the content-ideas collection (dedupe before store).
+
+ ## Protocol (every scout run)
+ Follow these steps. Do not skip step 1.
+
+ ### 1. Map the tree (kb_search)
+ Call `kb_search` with 2–4 focused queries that cover the topic area.
+ Example queries:
+ - `"kgateway HTTPRoute internal TLS"`
+ - `"ArgoCD ApplicationSet multi-cluster"`
+ - `"eBPF Cilium NetworkPolicy"`
+ - `monero`
+ - `stablecoin opportunites`
+ - `roblox engineering`
+
+ From hits, extract:
+ - Covered paths (`tree/…`)
+ - Headings / tags already strong
+ - **Gaps**: missing depth, stale framing, no lab notes, no failure modes
+
+ If `kb_search` fails, say so and continue with external research only —
+ mark confidence lower.
+
+ ### 2. Scout external signals (freshness: last 1–2 weeks)
+ Use Firecrawl tools against YouTube, Reddit, HN, blogs, papers, GitHub.
+ Prefer primary sources and reproducible recipes over opinion threads.
+
+ ### 3. Deduce & propose
+ For each idea, reason briefly:
+ - Gap in tree? (cite `path=` from kb_search)
+ - Evidence? (URLs + dates)
+ - Where it should land? (suggested `tree/…` path)
+
+ Quality bar: **5–10 solid proposals** per full scout. Skip thin ideas.
+
+ ### 4. Output format (always)
+ Emit proposals as a markdown list. Each item MUST use this template:
+
+ ```
+ ###
+ - **Why**: audience pain + evidence (1–2 sentences)
+ - **Gap**: what kb_search showed is missing (cite tree paths)
+ - **Suggested path**: tree//...
+ - **Sources**: URL (date) · URL (date)
+ - **Category**: kubernetes | networking | gitops | secrets | observability | aws | ai | other
+ - **Freshness**: YYYY-MM-DD — why now
+ - **Confidence**: high | medium | low
+ ```
+
+ End with a short **Coverage summary**: topics searched, paths already
+ covered, gaps still open.
+
+ When an idea is approved later: content is converted to markdown and
+ the tree is updated via pull request. You do **not** write files yourself.
+
+ ## Hard guardrails
+ - NEVER modify cluster infrastructure (kubectl apply/delete, CRDs, etc.)
+ - NEVER install system packages
+ - NEVER invent `tree/` paths as if they exist — only cite paths returned
+ by `kb_search`, or clearly label new paths as **proposed**
+ - NEVER expose write tools against the `knowledge` collection
+ - If unsure whether an action is safe, report instead of acting
+ - Answer ONLY with research findings + proposals; no filler
+ - Must be in English
+
+ ## Style
+ Practical, hands-on, honest. Lab notes and failure modes beat theory.
+ English, structured, citeable. Breadth with signal, not link dumps.
+ tools:
+ - type: McpServer
+ mcpServer:
+ kind: MCPServer
+ name: kb-retrieval
+ toolNames:
+ - kb_search
+ - type: McpServer
+ mcpServer:
+ kind: RemoteMCPServer
+ name: kagent-tool-server
+ toolNames:
+ - shell
+ - datetime_get_current_time
+ - type: McpServer
+ mcpServer:
+ kind: RemoteMCPServer
+ name: firecrawl
+ toolNames:
+ - firecrawl_firecrawl_search
+ - firecrawl_firecrawl_agent
+ - firecrawl_firecrawl_agent_status
+ - firecrawl_firecrawl_research_search_github
+ - firecrawl_firecrawl_research_search_papers
+ - type: McpServer
+ mcpServer:
+ kind: RemoteMCPServer
+ name: qdrant-mcp
+ toolNames:
+ - qdrant-find
+ - qdrant-store
diff --git a/chart/templates/mcp_server.yaml b/chart/templates/mcp_server.yaml
new file mode 100644
index 0000000..85fe50e
--- /dev/null
+++ b/chart/templates/mcp_server.yaml
@@ -0,0 +1,73 @@
+apiVersion: {{ .Values.mcpServer.apiVersion }}
+kind: MCPServer
+metadata:
+ name: {{ .Values.mcpServer.name }}
+ namespace: {{ .Values.namespace }}
+ labels:
+ app.kubernetes.io/name: {{ .Values.mcpServer.name }}
+ app.kubernetes.io/part-of: knowledge
+ app.kubernetes.io/component: mcp-retrieval
+spec:
+ transportType: {{ .Values.mcpServer.transportType }}
+ stdioTransport: {}
+ timeout: {{ .Values.mcpServer.timeout | quote }}
+ deployment:
+ image: "{{ .Values.image.repository }}:{{ .Values.image.tag }}"
+ imagePullPolicy: {{ .Values.image.pullPolicy }}
+ {{- with .Values.image.pullSecrets }}
+ imagePullSecrets:
+ {{- toYaml . | nindent 6 }}
+ {{- end }}
+ port: {{ .Values.mcpServer.port }}
+ replicas: {{ .Values.mcpServer.replicas }}
+ cmd: {{ .Values.mcpServer.cmd | quote }}
+ args:
+ {{- toYaml .Values.mcpServer.args | nindent 6 }}
+ env:
+ QDRANT_NETWORK: {{ .Values.qdrant.network | quote }}
+ QDRANT_INTERNAL_URL: {{ .Values.qdrant.internalUrl | quote }}
+ QDRANT_EXTERNAL_URL: {{ .Values.qdrant.externalUrl | quote }}
+ {{- if .Values.qdrant.url }}
+ QDRANT_URL: {{ .Values.qdrant.url | quote }}
+ {{- end }}
+ {{- if .Values.qdrant.verify }}
+ QDRANT_VERIFY: {{ .Values.qdrant.verify | quote }}
+ {{- end }}
+ {{- if .Values.qdrant.apikey }}
+ QDRANT_API_KEY: {{ .Values.qdrant.apikey | quote }}
+ {{- end }}
+ COLLECTION_NAME: {{ .Values.qdrant.collection | quote }}
+ EMBEDDING_MODEL: {{ .Values.embedding.model | quote }}
+ KB_SEARCH_DEFAULT_K: {{ .Values.search.defaultK | quote }}
+ KB_SEARCH_MAX_K: {{ .Values.search.maxK | quote }}
+ HOME: /home/mcp
+ PYTHONUNBUFFERED: "1"
+ PYTHONDONTWRITEBYTECODE: "1"
+ FASTEMBED_CACHE_PATH: {{ .Values.fastembedCachePath | quote }}
+ {{- if and .Values.qdrant.existingSecretEnabled .Values.qdrant.existingSecret }}
+ # Secret keys become env vars (kmcp envFrom). Expect key: QDRANT_API_KEY
+ {{- end }}
+ volumeMounts:
+ {{- if .Values.writableVolumes.home }}
+ - name: home
+ mountPath: /home/mcp
+ {{- end }}
+ {{- if .Values.writableVolumes.tmp }}
+ - name: tmp
+ mountPath: /tmp
+ {{- end }}
+ volumes:
+ {{- if .Values.writableVolumes.home }}
+ - name: home
+ emptyDir: {}
+ {{- end }}
+ {{- if .Values.writableVolumes.tmp }}
+ - name: tmp
+ emptyDir: {}
+ {{- end }}
+ resources:
+ {{- toYaml .Values.resources | nindent 6 }}
+ podSecurityContext:
+ {{- toYaml .Values.podSecurityContext | nindent 6 }}
+ securityContext:
+ {{- toYaml .Values.securityContext | nindent 6 }}
diff --git a/chart/values.yaml b/chart/values.yaml
new file mode 100644
index 0000000..1e30cda
--- /dev/null
+++ b/chart/values.yaml
@@ -0,0 +1,90 @@
+# knowledge-tree chart — kb-retrieval MCPServer + knowledge-scout Agent
+
+# Namespace for MCPServer / Agent CRs (kagent lives in `ai` on mlops).
+namespace: ai
+
+# TODO: publish the image (make docker-push) before cluster deploy.
+# Placeholder registry path — replace if your org uses a different GHCR/name.
+image:
+ repository: ghcr.io/teaglebuilt/kb-retrieval
+ tag: "0.1.0"
+ pullPolicy: IfNotPresent
+ pullSecrets:
+ - name: ghcr-secret
+
+mcpServer:
+ name: kb-retrieval
+ # kagent MCPServer CR apiVersion (stdio stdioTransport).
+ apiVersion: kagent.dev/v1alpha1
+ transportType: stdio
+ timeout: 120s
+ replicas: 1
+ port: 3000
+ # Explicit cmd so the CR does not rely solely on image ENTRYPOINT.
+ cmd: python
+ args:
+ - -m
+ - kb.mcp_retrieval
+
+# Qdrant connection. When url is empty, QDRANT_NETWORK selects internal vs external.
+# Prefer network=internal for in-cluster DNS (pod near Qdrant on application/data).
+qdrant:
+ network: internal
+ internalUrl: http://qdrant.data.svc.cluster.local:6333
+ externalUrl: https://qdrant.homelab.internal
+ # Set via `make helm-deploy` from QDRANT_API_KEY in .envrc — do not commit real keys.
+ apikey: ""
+ # Optional hard override (wins over network mode when set).
+ url: ""
+ # Empty → kb.config defaults (verify=true for internal HTTP, false for external TLS).
+ verify: ""
+ collection: knowledge
+ # Existing Secret in the same namespace; keys are injected as env (envFrom).
+ # Create e.g.: kubectl -n ai create secret generic qdrant-apikey --from-literal=QDRANT_API_KEY=...
+ # Prefer existingSecret over --set for production.
+ # Set false to omit secretRefs (local/dev without auth).
+ existingSecretEnabled: false
+
+embedding:
+ model: BAAI/bge-small-en-v1.5
+
+search:
+ defaultK: "8"
+ maxK: "20"
+
+# Baked FastEmbed cache path inside the image (do not mount emptyDir over this).
+fastembedCachePath: /opt/fastembed
+
+resources:
+ requests:
+ cpu: 100m
+ memory: 512Mi
+ limits:
+ cpu: "1"
+ memory: 2Gi
+
+podSecurityContext:
+ runAsNonRoot: true
+ runAsUser: 1000
+ runAsGroup: 1000
+ fsGroup: 1000
+ seccompProfile:
+ type: RuntimeDefault
+
+securityContext:
+ allowPrivilegeEscalation: false
+ capabilities:
+ drop:
+ - ALL
+ readOnlyRootFilesystem: true
+ runAsNonRoot: true
+
+# emptyDir mounts for writable paths when root FS is read-only.
+# Model weights stay at fastembedCachePath (image layer); HOME is for runtime only.
+writableVolumes:
+ home: true
+ tmp: true
+
+agent:
+ # knowledge-scout Agent template (chart/templates/agent.yaml) — enable when ready.
+ enabled: true
diff --git a/docs/architecture.md b/docs/architecture.md
index 1785d7f..04a3c50 100644
--- a/docs/architecture.md
+++ b/docs/architecture.md
@@ -42,7 +42,15 @@
│ │ make sync │ (homelab k8s) │ backup │ │
│ .lancedb/ │ ─────────────▶ │ collection: │ ─────────────▶ │ snapshots / │
│ kb.duckdb │ │ knowledge │ ◀───────────── │ object storage │
- └────────────────────┘ └────────────────────┘ restore └────────────────────┘
+ └────────────────────┘ └─────────┬──────────┘ restore └────────────────────┘
+ │
+ │ kb_search (MCP)
+ ▼
+ ┌────────────────────┐
+ │ kb-retrieval MCP │
+ │ QDRANT_NETWORK= │
+ │ internal|external │
+ └────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
diff --git a/kb/adapters/__init__.py b/kb/adapters/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/kb/adapters/qdrant.py b/kb/adapters/qdrant.py
new file mode 100644
index 0000000..2d33eb4
--- /dev/null
+++ b/kb/adapters/qdrant.py
@@ -0,0 +1,53 @@
+"""Shared Qdrant client factory (sync + MCP read plane)."""
+from __future__ import annotations
+
+from urllib.parse import urlparse
+
+from .. import config
+
+
+def client():
+ """Build a QdrantClient using URL port/scheme defaults correctly.
+
+ qdrant-client defaults port=6333 even for https://host with no port,
+ which breaks ingress on 443. Prefer the URL's port, else scheme default.
+ """
+ from qdrant_client import QdrantClient
+
+ parsed = urlparse(config.QDRANT_URL)
+ if parsed.port is not None:
+ port = parsed.port
+ else:
+ port = 443 if parsed.scheme == "https" else 6333
+
+ return QdrantClient(
+ url=config.QDRANT_URL,
+ port=port,
+ api_key=config.QDRANT_API_KEY,
+ check_compatibility=False,
+ verify=config.QDRANT_VERIFY,
+ )
+
+
+def unnamed_vector_size(collection_info) -> int:
+ """Return size of the unnamed/default vector, or raise if named-only."""
+ vectors = collection_info.config.params.vectors
+ if hasattr(vectors, "size"):
+ return int(vectors.size)
+ raise RuntimeError(
+ "Collection uses named vectors; knowledge expects the unnamed default vector"
+ )
+
+
+def assert_collection_compatible(qdrant, collection: str, expected_dim: int) -> None:
+ """Fail fast if the collection is missing or wrong dimensionality."""
+ existing = {c.name for c in qdrant.get_collections().collections}
+ if collection not in existing:
+ raise RuntimeError(
+ f"Qdrant collection {collection!r} not found at {config.QDRANT_URL}"
+ )
+ size = unnamed_vector_size(qdrant.get_collection(collection))
+ if size != expected_dim:
+ raise RuntimeError(
+ f"Collection {collection!r} vector size is {size}, expected {expected_dim}"
+ )
diff --git a/kb/config.py b/kb/config.py
index 2256e66..e0aff71 100644
--- a/kb/config.py
+++ b/kb/config.py
@@ -10,6 +10,11 @@
_vol = os.environ.get("KNOWLEDGE_VOLUME_PATH", "").strip()
SOURCE_VOLUME = Path(_vol).expanduser() if _vol else None
+# Local staging dir when the volume is TCC-blocked for Python (macOS /Volumes).
+# Finder can still copy; extract stages there then reads.
+_cache = os.environ.get("KB_SOURCE_CACHE", "").strip()
+SOURCE_CACHE = Path(_cache).expanduser() if _cache else ROOT / ".cache" / "sources"
+
TREE_DIR = os.environ.get("KB_TREE_DIR", "tree")
BRANCHES_PATH = Path(os.environ.get("KB_BRANCHES", ROOT / TREE_DIR / "branches.yaml"))
SOPS_CONFIG_PATH = Path(os.environ.get("KB_SOPS_CONFIG", ROOT / ".sops.yaml"))
@@ -19,7 +24,12 @@
LANCE_TABLE = os.environ.get("KB_LANCE_TABLE", "chunks")
-EMBED_MODEL = os.environ.get("KB_EMBED_MODEL", "BAAI/bge-small-en-v1.5")
+# Story / chart aliases: EMBEDDING_MODEL, COLLECTION_NAME
+EMBED_MODEL = (
+ os.environ.get("EMBEDDING_MODEL")
+ or os.environ.get("KB_EMBED_MODEL")
+ or "BAAI/bge-small-en-v1.5"
+)
EMBED_DIM = int(os.environ.get("KB_EMBED_DIM", "384"))
CHILD_TOKENS = int(os.environ.get("KB_CHILD_TOKENS", "450"))
@@ -27,14 +37,49 @@
GOLDEN_PATH = Path(os.environ.get("KB_GOLDEN", ROOT / "eval" / "golden.yaml"))
-QDRANT_URL = os.environ.get("QDRANT_URL", "https://qdrant.homelab.internal")
+# Qdrant network mode selects cluster DNS vs gateway when QDRANT_URL is unset.
+# internal — in-cluster Service DNS (application/data next to Qdrant)
+# external — cross-cluster / laptop via ingress gateway
+_qdrant_network = os.environ.get("QDRANT_NETWORK", "external").strip().lower()
+if _qdrant_network in {"internal", "incluster", "cluster", "in-cluster"}:
+ QDRANT_NETWORK = "internal"
+elif _qdrant_network in {"external", "gateway", "outcluster", "out-of-cluster"}:
+ QDRANT_NETWORK = "external"
+else:
+ raise ValueError(
+ f"QDRANT_NETWORK={_qdrant_network!r}; expected 'internal' or 'external'"
+ )
+
+QDRANT_INTERNAL_URL = os.environ.get(
+ "QDRANT_INTERNAL_URL", "http://qdrant.data.svc.cluster.local:6333"
+)
+QDRANT_EXTERNAL_URL = os.environ.get(
+ "QDRANT_EXTERNAL_URL", "https://qdrant.homelab.internal"
+)
+
+if os.environ.get("QDRANT_URL"):
+ QDRANT_URL = os.environ["QDRANT_URL"]
+elif QDRANT_NETWORK == "internal":
+ QDRANT_URL = QDRANT_INTERNAL_URL
+else:
+ QDRANT_URL = QDRANT_EXTERNAL_URL
+
QDRANT_API_KEY = os.environ.get("QDRANT_API_KEY") # optional
-QDRANT_COLLECTION = os.environ.get("QDRANT_COLLECTION", "knowledge")
+QDRANT_COLLECTION = (
+ os.environ.get("COLLECTION_NAME")
+ or os.environ.get("QDRANT_COLLECTION")
+ or "knowledge"
+)
-_qdrant_verify = os.environ.get("QDRANT_VERIFY", "true").strip()
+# TLS verify: default off for external gateway (homelab CA); on for in-cluster HTTP.
+_default_verify = "true" if QDRANT_NETWORK == "internal" else "false"
+_qdrant_verify = os.environ.get("QDRANT_VERIFY", _default_verify).strip()
if _qdrant_verify.lower() in {"0", "false", "no", "off"}:
QDRANT_VERIFY: bool | str = False
elif _qdrant_verify.lower() in {"1", "true", "yes", "on"}:
QDRANT_VERIFY = True
else:
QDRANT_VERIFY = _qdrant_verify # path to CA bundle
+
+KB_SEARCH_DEFAULT_K = int(os.environ.get("KB_SEARCH_DEFAULT_K", "8"))
+KB_SEARCH_MAX_K = int(os.environ.get("KB_SEARCH_MAX_K", "20"))
diff --git a/kb/embed.py b/kb/embed.py
index 00f5251..fd0373e 100644
--- a/kb/embed.py
+++ b/kb/embed.py
@@ -20,4 +20,6 @@ def embed(texts: list[str]) -> list[list[float]]:
def embed_query(text: str) -> list[float]:
- return embed([text])[0]
+ """Query-space embedding (FastEmbed query_embed, not passage embed)."""
+ vector = next(_model().query_embed(text))
+ return vector.tolist()
diff --git a/kb/extract.py b/kb/extract.py
index f11b7d1..a21d2fd 100644
--- a/kb/extract.py
+++ b/kb/extract.py
@@ -3,6 +3,7 @@
import datetime as _dt
import hashlib
import re
+import subprocess
import xml.etree.ElementTree as ET
from pathlib import Path
from typing import NamedTuple
@@ -70,6 +71,78 @@ def _sha256(p: Path) -> str:
return h.hexdigest()
+def _can_read(p: Path) -> bool:
+ """True if Python can open bytes (stat can succeed while open is TCC-blocked)."""
+ try:
+ if _is_bundle(p):
+ for f in p.rglob("*"):
+ if f.is_file():
+ with f.open("rb") as fh:
+ fh.read(1)
+ return True
+ return p.is_dir()
+ with p.open("rb") as fh:
+ fh.read(1)
+ return True
+ except OSError:
+ return False
+
+
+def _applescript_quote(s: str) -> str:
+ return s.replace("\\", "\\\\").replace('"', '\\"')
+
+
+def _finder_stage(src: Path, dest: Path) -> Path:
+ """Copy src → dest via Finder (bypasses macOS TCC that blocks Python on /Volumes)."""
+ dest.parent.mkdir(parents=True, exist_ok=True)
+ src_q = _applescript_quote(str(src))
+ dest_dir_q = _applescript_quote(str(dest.parent) + "/")
+ script = f'''
+tell application "Finder"
+ set srcItem to POSIX file "{src_q}" as alias
+ set destFolder to POSIX file "{dest_dir_q}" as alias
+ duplicate srcItem to destFolder with replacing
+end tell
+'''
+ proc = subprocess.run(
+ ["osascript", "-e", script],
+ capture_output=True,
+ text=True,
+ )
+ if proc.returncode != 0:
+ err = (proc.stderr or proc.stdout or "Finder duplicate failed").strip()
+ raise OSError(err)
+
+ staged = dest.parent / src.name
+ if staged.resolve() != dest.resolve():
+ if dest.exists():
+ if dest.is_dir():
+ import shutil
+ shutil.rmtree(dest)
+ else:
+ dest.unlink()
+ staged.rename(dest)
+ return dest
+
+
+def _ensure_readable(src: Path, declared: str) -> Path:
+ """Return a path Python can read; stage via Finder into SOURCE_CACHE if needed."""
+ if _can_read(src):
+ return src
+
+ cache = config.SOURCE_CACHE / declared
+ if cache.exists() and _can_read(cache):
+ # Refresh when volume file looks newer (mtime/size via stat still works under TCC).
+ try:
+ src_stat, cache_stat = src.stat(), cache.stat()
+ if src_stat.st_size == cache_stat.st_size and src_stat.st_mtime <= cache_stat.st_mtime:
+ return cache
+ except OSError:
+ return cache
+
+ print(f" ~ staging (TCC): {declared} -> {cache.relative_to(config.ROOT) if cache.is_relative_to(config.ROOT) else cache}")
+ return _finder_stage(src, cache)
+
def _clean_title(stem: str) -> str:
s = _ZLIB_NOISE.sub("", stem)
s = re.sub(r"\(\s*\)", "", s) # drop parens emptied by noise removal
@@ -169,7 +242,7 @@ def _pdf_to_md(path: Path) -> str:
pymupdf4llm.use_layout(False)
except Exception:
pass
- return _collapse_blank(pymupdf4llm.to_markdown(str(path), show_progress=False))
+ return _collapse_blank(pymupdf4llm.to_markdown(str(path), show_progress=True))
def _convert(path: Path) -> str:
@@ -225,11 +298,17 @@ def _frontmatter(decl: Decl, source: Path, source_hash: str) -> str:
def run(force: bool = False) -> dict:
extracted = skipped = failed = missing = 0
+ print("extraced", extracted)
+ print("skipped", skipped)
+ print("failed", failed)
+ print("missing", missing)
for decl in declarations():
label = "/".join((*decl.domain, decl.bucket, decl.slug))
+ print("label", label)
try:
src = decl.resolve()
+ print("source", src)
except ValueError as e:
print(f" ! {label}: {e}")
failed += 1
@@ -241,10 +320,13 @@ def run(force: bool = False) -> dict:
continue
target = decl.target
+ print("target", target)
try:
- src_hash = _sha256(src)
+ readable = _ensure_readable(src, decl.declared)
+ src_hash = _sha256(readable)
except OSError as e: # unreadable mount, permissions, vanished file
- print(f" ! {label}: cannot read source ({e.strerror})")
+ detail = e.strerror or str(e)
+ print(f" ! {label}: cannot read source ({detail})")
failed += 1
continue
@@ -253,7 +335,8 @@ def run(force: bool = False) -> dict:
continue
try:
- body = _convert(src)
+ body = _convert(readable)
+ print("body", body)
except Exception as e: # a bad file shouldn't sink the whole run
print(f" ! {label}: {type(e).__name__}: {e}")
failed += 1
diff --git a/kb/mcp_retrieval/__init__.py b/kb/mcp_retrieval/__init__.py
new file mode 100644
index 0000000..a706aa4
--- /dev/null
+++ b/kb/mcp_retrieval/__init__.py
@@ -0,0 +1,5 @@
+"""Knowledge-tree read plane: MCP tools over Qdrant `knowledge`."""
+
+from .server import create_server, mcp
+
+__all__ = ["create_server", "mcp"]
diff --git a/kb/mcp_retrieval/__main__.py b/kb/mcp_retrieval/__main__.py
new file mode 100644
index 0000000..2032c87
--- /dev/null
+++ b/kb/mcp_retrieval/__main__.py
@@ -0,0 +1,45 @@
+"""Entry: python -m kb.mcp_retrieval [--transport stdio|streamable-http]."""
+from __future__ import annotations
+
+import argparse
+import os
+import sys
+
+from .. import config
+from .server import mcp
+
+
+def main(argv: list[str] | None = None) -> int:
+ parser = argparse.ArgumentParser(
+ prog="kb.mcp_retrieval",
+ description="Knowledge-tree MCP read plane (kb_search → Qdrant)",
+ )
+ parser.add_argument(
+ "--transport",
+ choices=("stdio", "sse", "streamable-http"),
+ default=os.environ.get("MCP_TRANSPORT", "stdio"),
+ )
+ parser.add_argument("--host", default=os.environ.get("MCP_HOST", "0.0.0.0"))
+ parser.add_argument(
+ "--port",
+ type=int,
+ default=int(os.environ.get("MCP_PORT", "3000")),
+ )
+ args = parser.parse_args(argv)
+
+ print(
+ f"kb-retrieval: network={config.QDRANT_NETWORK} "
+ f"url={config.QDRANT_URL} collection={config.QDRANT_COLLECTION} "
+ f"transport={args.transport}",
+ file=sys.stderr,
+ )
+
+ if args.transport == "stdio":
+ mcp.run(transport="stdio")
+ else:
+ mcp.run(transport=args.transport, host=args.host, port=args.port)
+ return 0
+
+
+if __name__ == "__main__":
+ raise SystemExit(main())
diff --git a/kb/mcp_retrieval/server.py b/kb/mcp_retrieval/server.py
new file mode 100644
index 0000000..aed7bd9
--- /dev/null
+++ b/kb/mcp_retrieval/server.py
@@ -0,0 +1,44 @@
+"""MCP API layer: expose kb_search only (read-only)."""
+from __future__ import annotations
+
+import asyncio
+
+from mcp.server.mcpserver import MCPServer
+
+from .. import config
+from .service import KnowledgeSearch
+
+mcp = MCPServer(
+ name="kb-retrieval",
+ instructions=(
+ "Read-only knowledge-tree retrieval over Qdrant collection "
+ f"{config.QDRANT_COLLECTION}. Use kb_search to find citeable chunks."
+ ),
+)
+
+_search: KnowledgeSearch | None = None
+
+
+def _service() -> KnowledgeSearch:
+ global _search
+ if _search is None:
+ _search = KnowledgeSearch()
+ return _search
+
+
+@mcp.tool()
+async def kb_search(query: str, k: int = config.KB_SEARCH_DEFAULT_K) -> str:
+ """Semantic search over the knowledge collection.
+
+ Returns ranked chunks with path, heading, tags, score, and text for citations.
+ """
+ service = _service()
+ return await asyncio.to_thread(service.search_formatted, query, k)
+
+
+def create_server(search: KnowledgeSearch | None = None) -> MCPServer:
+ """Build the MCP server; optionally inject a search service (tests)."""
+ global _search
+ if search is not None:
+ _search = search
+ return mcp
diff --git a/kb/mcp_retrieval/service.py b/kb/mcp_retrieval/service.py
new file mode 100644
index 0000000..d9d5b3f
--- /dev/null
+++ b/kb/mcp_retrieval/service.py
@@ -0,0 +1,47 @@
+"""Service: embed query → ANN search → citation-friendly text."""
+from __future__ import annotations
+
+from .. import config, embed
+from .store import QdrantChunkStore, SearchHit
+
+
+class KnowledgeSearch:
+ """Read-only knowledge search (no writes)."""
+
+ def __init__(self, store: QdrantChunkStore | None = None) -> None:
+ self._store = store or QdrantChunkStore()
+
+ def search(self, query: str, k: int | None = None) -> list[SearchHit]:
+ question = query.strip()
+ if not question:
+ raise ValueError("query must be a non-empty string")
+ limit = _clamp_k(k)
+ vector = embed.embed_query(question)
+ return self._store.search(vector, limit)
+
+ def search_formatted(self, query: str, k: int | None = None) -> str:
+ hits = self.search(query, k)
+ return format_hits(hits)
+
+
+def _clamp_k(k: int | None) -> int:
+ if k is None:
+ return config.KB_SEARCH_DEFAULT_K
+ if k < 1:
+ raise ValueError("k must be >= 1")
+ return min(k, config.KB_SEARCH_MAX_K)
+
+
+def format_hits(hits: list[SearchHit]) -> str:
+ if not hits:
+ return "No results."
+ blocks = []
+ for hit in hits:
+ tags = ",".join(hit.tags)
+ blocks.append(
+ f'\n'
+ f"{hit.text.strip()}\n"
+ f""
+ )
+ return "\n\n".join(blocks)
diff --git a/kb/mcp_retrieval/store.py b/kb/mcp_retrieval/store.py
new file mode 100644
index 0000000..7f0ef76
--- /dev/null
+++ b/kb/mcp_retrieval/store.py
@@ -0,0 +1,52 @@
+"""Repository: read-only ANN search against Qdrant."""
+from __future__ import annotations
+
+from dataclasses import dataclass
+from typing import Any
+
+from .. import config
+from ..adapters import qdrant
+
+
+@dataclass(frozen=True)
+class SearchHit:
+ score: float
+ path: str
+ heading: str
+ tags: list[str]
+ text: str
+ chunk_id: str
+
+
+class QdrantChunkStore:
+ """Thin wrapper around Qdrant query_points (unnamed default vector)."""
+
+ def __init__(self, client: Any | None = None) -> None:
+ self._client = client or qdrant.client()
+ qdrant.assert_collection_compatible(
+ self._client, config.QDRANT_COLLECTION, config.EMBED_DIM
+ )
+
+ def search(self, vector: list[float], limit: int) -> list[SearchHit]:
+ response = self._client.query_points(
+ collection_name=config.QDRANT_COLLECTION,
+ query=vector,
+ limit=limit,
+ with_payload=True,
+ )
+ return [_to_hit(point) for point in response.points]
+
+
+def _to_hit(point: Any) -> SearchHit:
+ payload = point.payload or {}
+ tags = payload.get("tags") or []
+ if not isinstance(tags, list):
+ tags = [str(tags)]
+ return SearchHit(
+ score=float(point.score or 0.0),
+ path=str(payload.get("path") or ""),
+ heading=str(payload.get("heading") or ""),
+ tags=[str(t) for t in tags],
+ text=str(payload.get("text") or ""),
+ chunk_id=str(payload.get("chunk_id") or ""),
+ )
diff --git a/kb/sync.py b/kb/sync.py
index f3f000a..106e680 100644
--- a/kb/sync.py
+++ b/kb/sync.py
@@ -3,27 +3,7 @@
import json
from . import config, store
-
-
-def _client():
- from urllib.parse import urlparse
-
- from qdrant_client import QdrantClient
- # qdrant-client defaults port=6333 even for https://host (no port in URL),
- # which breaks ingress on 443. Use the URL's port, else scheme default.
- parsed = urlparse(config.QDRANT_URL)
- if parsed.port is not None:
- port = parsed.port
- else:
- port = 443 if parsed.scheme == "https" else 6333
-
- return QdrantClient(
- url=config.QDRANT_URL,
- port=port,
- api_key=config.QDRANT_API_KEY,
- check_compatibility=False,
- verify=config.QDRANT_VERIFY,
- )
+from .adapters.qdrant import client as _client
def _point_id(chunk_id: str) -> str:
diff --git a/pyproject.toml b/pyproject.toml
index 74d9097..bd8717f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -8,6 +8,7 @@ dependencies = [
"duckdb>=1.1",
"fastembed>=0.4",
"qdrant-client>=1.12",
+ "mcp[cli]>=1.6",
"pyyaml>=6.0",
"tantivy>=0.22", # enables LanceDB full-text (BM25) index for hybrid search
"ebooklib>=0.18", # epub reader (spine -> XHTML) for source extraction
diff --git a/uv.lock b/uv.lock
index 8f8a822..cf00816 100644
--- a/uv.lock
+++ b/uv.lock
@@ -8,6 +8,15 @@ resolution-markers = [
"python_full_version < '3.12'",
]
+[[package]]
+name = "annotated-doc"
+version = "0.0.5"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/5a/8e/38aa427ed5402449e226975b649c5dc73ccadfefeb95e6aecb8f8ea4b6b6/annotated_doc-0.0.5.tar.gz", hash = "sha256:c7e58ce09192557605d8bbd92836d7e1d520ac9580096042c0bfd197efacf1bb", size = 10758 }
+wheels = [
+ { url = "https://files.pythonhosted.org/packages/3e/30/e900b21425a860e195f32e37657aa1f7c7f2b1bfb26f03ca209b90933c06/annotated_doc-0.0.5-py3-none-any.whl", hash = "sha256:117bac03a25ede5df5440e855b32d556049ca169ead221505badf432fed4b101", size = 5302 },
+]
+
[[package]]
name = "annotated-types"
version = "0.8.0"
@@ -30,6 +39,15 @@ wheels = [
{ url = "https://files.pythonhosted.org/packages/da/35/f2287558c17e29fafc8ef3daf819bb9834061cfa43bff8014f7df7f63bdc/anyio-4.14.2-py3-none-any.whl", hash = "sha256:9f505dda5ac9f0c8309b5e8bd445a8c2bf7246f3ce950121e45ea15bc41d1494", size = 125813 },
]
+[[package]]
+name = "attrs"
+version = "26.1.0"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/9a/8e/82a0fe20a541c03148528be8cac2408564a6c9a0cc7e9171802bc1d26985/attrs-26.1.0.tar.gz", hash = "sha256:d03ceb89cb322a8fd706d4fb91940737b6642aa36998fe130a9bc96c985eff32", size = 952055 }
+wheels = [
+ { url = "https://files.pythonhosted.org/packages/64/b4/17d4b0b2a2dc85a6df63d1157e028ed19f90d4cd97c36717afef2bc2f395/attrs-26.1.0-py3-none-any.whl", hash = "sha256:c647aa4a12dfbad9333ca4e71fe62ddc36f4e63b2d260a37a8b83d2f043ac309", size = 67548 },
+]
+
[[package]]
name = "beautifulsoup4"
version = "4.15.0"
@@ -52,6 +70,104 @@ wheels = [
{ url = "https://files.pythonhosted.org/packages/0b/a7/71ac2cff56fec219ed242bb11b8efb69fcc4bec75db06fb7bfe35de520e6/certifi-2026.7.22-py3-none-any.whl", hash = "sha256:62f22742b58a1a33014a2b6b706588a8d7e2a88ae7bd1a6ebe8c992928483775", size = 136983 },
]
+[[package]]
+name = "cffi"
+version = "2.1.1"
+source = { registry = "https://pypi.org/simple" }
+dependencies = [
+ { name = "pycparser", marker = "implementation_name != 'PyPy'" },
+]
+sdist = { url = "https://files.pythonhosted.org/packages/9e/ef/008a1939e372c06329a3fce4279c02f328488f3526744906eeec3da7ad5f/cffi-2.1.1.tar.gz", hash = "sha256:dd31f52ea1086513bb9df30f8fcee9b8918323ae067a3d5b78bc826a000712be", size = 530807 }
+wheels = [
+ { url = "https://files.pythonhosted.org/packages/70/d2/16d99a0c4948febc0ebd133a13b2f688ff7f8cb04da971e1128872ce0c03/cffi-2.1.1-cp311-cp311-macosx_10_15_x86_64.whl", hash = "sha256:c8d2c9fd1f2d16f780d15127abb050d13d1a76c03a4bd87d7e4980e45e511e12", size = 183838 },
+ { url = "https://files.pythonhosted.org/packages/cd/95/31b535a9f0220ae9f357de4a08d57ce89cb417653c2fd9f075f50822a388/cffi-2.1.1-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:398aff33cee2767e3e781d2554c54bd0dff386bb437581e0d8011fde1a942ec1", size = 184168 },
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