Issues

• Samtools sort has wrong -m parameter

  vollgerlab/StainedGlass#50 · Filter by author haraldgrove opened on Mar 13, 2026

• Error in rule pair_end_bed with large chromosomes.

  vollgerlab/StainedGlass#49 · Filter by author yuanhelianyi opened on Aug 27, 2025
  1

• How to adjust the color scale manually?

  vollgerlab/StainedGlass#47 · Filter by author yuanhao0626 opened on Jun 4, 2024

• Alignment Mode and Parameter Adjustment in StainedGlass

  vollgerlab/StainedGlass#43 · Filter by author justdx opened on Apr 16, 2024

• subprocess.CalledProcessError: Command 'conda info --json' returned non-zero exit status 127.

  vollgerlab/StainedGlass#42 · Filter by author danli349 opened on Apr 11, 2024

• IndentationError in file D:\R\plots\StainedGlass\workflow\Snakefile, line 51:

  vollgerlab/StainedGlass#41 · Filter by author danli349 opened on Apr 11, 2024

• Diagonal Comparison Score

  vollgerlab/StainedGlass#38 · Filter by author Ne0tea opened on Feb 24, 2024
  1

• Errors

  vollgerlab/StainedGlass#32 · Filter by author diego-rt opened on Jan 2, 2024

• running error when changed the window size

  vollgerlab/StainedGlass#29 · Filter by author HippoYI opened on Aug 4, 2023