Issues

• anndataR library

  Biostatistics-Unit-HT/Flanders#127 · Filter by author ariannalandini opened on Oct 29, 2026

• Some improvements/simplification regarding PLINK

  Biostatistics-Unit-HT/Flanders#126 · Filter by author ariannalandini opened on Oct 29, 2026

• Are the native SuSiE credible sets saved anywhere?

  Biostatistics-Unit-HT/Flanders#124 · Filter by author nickhir opened on Jul 30, 2026
  1

• Flanders fails to lift over X chromosome

  Biostatistics-Unit-HT/Flanders#113 · Filter by author shoffm opened on Jan 14, 2026
  1

• Add TileDB locusbreaker option

  enhancement
  Biostatistics-Unit-HT/Flanders#94 · Filter by author bruno-ariano opened on Aug 29, 2025
  

• Allow per phenotype p-value thresholds

  enhancement
  Feature

  Biostatistics-Unit-HT/Flanders#87 · Filter by author edg1983 opened on Aug 7, 2025
  1

• Avoid generating large BED/BIM/FAM datasets when we process BIM inputs

  enhancement
  Feature

  Biostatistics-Unit-HT/Flanders#78 · Filter by author edg1983 opened on Jun 4, 2025

• Allow specification of sample size in the input table

  enhancement
  Feature

  Biostatistics-Unit-HT/Flanders#58 · Filter by author edg1983 opened on May 22, 2025
  1

• Improve management of anndata during finemapping

  enhancement
  Feature

  Biostatistics-Unit-HT/Flanders#53 · Filter by author edg1983 opened on May 20, 2025
  1

• Re-factor R scripts to avoid large imports

  enhancement
  Biostatistics-Unit-HT/Flanders#39 · Filter by author edg1983 opened on Apr 7, 2025

• Output version of the tools used.

  enhancement
  Biostatistics-Unit-HT/Flanders#25 · Filter by author edg1983 opened on Mar 27, 2025

• Implement module specific conda environments.

  enhancement
  Biostatistics-Unit-HT/Flanders#8 · Filter by author edg1983 opened on Mar 12, 2025