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SFB93/Dhc195 graph: distinguish recipient activity and exact-pair acetylene rescue #1388

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@realmarcin

Dehalococcoides_Pelobacter_Acetylene_TCE_Coculture.yaml (000184).

The reductive-dechlorination node is labelled as Dhc195-to-SFB93 CROSS_FEEDING without evidence of reverse nutrient transfer. The relief node describes the ANAS enrichment but points to the strain-195 phenotype, and COLONIZATION_FACILITATION is not the measured process.

Primary PMID:28075122, Results and Figure 2 caption, directly tests recovery of acetylene-inhibited strain 195 after SFB93 addition. Retain that positive arrow with exact-pair scope, rather than importing ANAS methanogenesis or deleting demonstrated rescue. The cached abstract rescue phrase refers to ANAS, so mark its exact-pair support PARTIAL and document the primary-body access separately. Do not restore paywalled text; #765 remains the separate evidence-debt follow-up. Preserve the curated Syntrophotalea GTDB pin (#384). All three nodes and two arrows can be retained.

Deduplication: 717 all-state issue titles/bodies, broader organism/biochar/acetylene/CO synonyms and ignored/hidden-inclusive scoped local review/history/research/tests/scripts. Relevant #1305, #1245, #1236, #900, #883, #765, #754, #561, #389, #384 and #383 were read; no duplicate exact graph defect in the searched material. Not all issue comments were searched.

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  1. realmarcin commented on Oct 6, 2026

    @realmarcin
    ContributorAuthor

    Existing graph defect addressed in #1393 at e62e9da; exact-head self-adversarial COMMENT #1393 (review). 354 passed in 182.27s (0:03:02); actual post-commit docs-current passed. Committed decisions/validation retain source limits. CO #1392 and metadata #765/#1391 remain open. This issue closes only after protected main merge.

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