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GL10 XL12 quantitative metadata: reconcile xylose endpoints before treating them as one yield #1429

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@realmarcin

Ecoli_GL10_XL12_D_Lactate_Mixed_Sugar_SynCom.yaml, PMID:42038008. The abstract gives 53.21% xylose utilization for 1:1 coculture, whereas Results 3.4.1 gives 1.22 g/L at 36 h from a 5 g/L feed, not the same percentage. Other growth/uptake endpoints occur at 72 h, while titers are reported at 36 h. Resolve against original supplementary plots/source data before attaching the abstract percentage to the baseline 36 h condition. Do not silently recompute/replace the published value or conflate yield, titer and productivity. Existing #827 separates article and supplement provenance; keep that separation. Graph-only edits preserve quantitative non-graph metadata as unresolved.

Deduplication: 748 all-state issue titles/bodies and ignored/hidden-inclusive local review, research, history, tests, scripts and workflow files. Relevant #1264, #826, #827, #830, #365 and #442 read; no exact duplicate within that scope. Not every issue comment searched. Primary cached main-body texts reviewed, not visual figures, raw data or separate supplements.

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  1. realmarcin commented on Oct 6, 2026

    @realmarcin
    ContributorAuthor

    Graph-only corrections published in #1430. This separate follow-up remains OPEN; non-graph raw blocks preserved, not certified. Source quantitative conflicts were disclosed rather than silently reconciled.

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