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Bound milk-line thiocillin and biofilm robustness claims to tested perturbations #1508

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@realmarcin

Record: kb/communities/Industrial_Milk_Line_FourSpecies_Model_Biofilm.yaml.

The current graph labels dynamic effects as niche partitioning, and robustness as colonization facilitation. It does not identify Kocuria as the inhibited member or distinguish wild-type versus tclE-H deletion conditions. A general return-to-equilibrium claim also exceeds the initial-inoculum and continuous-perturbation comparisons.

The primary paper supports positive genetic evidence: tclE-H deletion removes anti-Kocuria activity and changes the model biofilm composition and its response to particular perturbations. Preserve both existing causal arrows, narrowed to those comparisons. Do not downgrade the genetic result to mere association, or claim complementation/purified-molecule rescue that was not identified in the main text. No universal robustness to continuous disturbance or all-member cooperation is established.

Complete cached main text, Methods, Tables 1-2 and captions 1-8/A1 read; no original images or raw dataset inspected. Use canonical participants and preserve the prior cultivation-arm correction under #529. B. cereus ATCC14579T is a laboratory substitution, not an original dairy isolate.

Dedup searched 813 all-state bodies and ignored/hidden artifacts. #258's former dangling target has already been repaired; this task concerns scientific scope and participants, not another dangling target. Keep open until protected-main merge.

Activity

  1. realmarcin commented on Oct 6, 2026

    @realmarcin
    ContributorAuthor

    Addressed in #1510 at 7aabb05; exact-head source-based self-adversarial review: #1510 (review). 503 passed in 188.92s (0:03:08); post-commit docs-current passed. Decision ledger and actual outputs/digests committed with source limitations. Not independent approval. Close only after protected main merge.

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