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Bound REE biosorption graph to laboratory interventions and proposed deposit-scale mechanisms #1517
All5 nodes and3 arrows overstate pairwise ecological benefits, laboratory-to-field mediation, and phylum-level weathering functions. Primary study supports separate isolate adsorption, cell-wall/teichoic-acid intervention and field associations, not measured Bacillus-to-Micrococcus commensalism or fungal mutualism. Preserve the positive reduction from65.5 to17.8 percent after wall teichoic-acid removal and HREE preference; residual adsorption remains. Freeze-dried binding is not active transport, and Yb/P colocalization does not resolve a unique bond geometry.
Repair all existing nodes with explicit canonical participant subsets; bound weathering-to-biosorption as HYPOTHESIZED and biosorption-to-profile enrichment as PARTIAL. Remove dysprosium-atom-as-ion annotation, free phosphate as bound wall groups and Y-ion56-184ppm (actually totalHREE). Acidobacteria generally decrease with depth, not demonstrated deep ligand production. Exact prior-literature weathering routes are not Renju perturbations. Whole record and full cached primary main text/Methods/Figures1-7 captions read; selected claims independently spot-checked in fresh NCBI XML. No new structure. Keep open until protected-main merge; non-graph claims are a separate follow-up.
Dedup:822 all-state issue titles/bodies and14 matching ignored/hidden local files. Closed#824 repaired Jiangshui wording, not these scientific findings. Relevant local contexts inspected; not every historical comment/review. No original figure pixels, external supplements, raw data or code audited. Self-review is not independent approval.
Addressed in #1522 at 3708730; exact-head self-review:#1522 (review). 519 passed in 179.14s (0:02:59); post-commit docs-current passed. Every-node/arrow decisions and actual output digests committed with explicit primary-source limits. Not independent approval. Close only after protected-main merge.
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realmarcin commentedon Oct 6, 2026
Addressed in #1522 at 3708730; exact-head self-review:#1522 (review). 519 passed in 179.14s (0:02:59); post-commit docs-current passed. Every-node/arrow decisions and actual output digests committed with explicit primary-source limits. Not independent approval. Close only after protected-main merge.