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Separate Nicotiana regolith outcomes from proposed causal mediators #1561

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@realmarcin

kb/communities/Lunar_Simulant_Phosphate_Solubilizing_Bacteria_Nicotiana.yaml, PMID:37945659. Whole primary text and 2026 correction PMID:42304108 read. The correction changes Fig1 particle-size labels, not biological conclusions. Attachment biomass-P and pH regressions do not selectively establish biofilm/organic-acid mediation. Individual-strain flasks tested five strains; plant pots used a three-strain mixture. Preserve measured attachment, phosphorus mobilization and plant outcomes, remove the two unsupported mediation arrows and ecological/mechanism labels, and distinguish IN_VITRO flask data from IN_VIVO plants. Named acids were not measured. Plant benefits depend on conditioning time; unconditioned treatment shortened seedlings, and MS phosphorus supplementation after day6 prevents attributing later outcomes exclusively to mobilized phosphorus. Record every node/arrow decision, history and tests. Close only after protected-main merge.

Source-based self-adversarial review, not independent approval. Existing-node/arrow repair only; no new causal structure or paid Edison submission.

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  1. realmarcin commented on Oct 6, 2026

    @realmarcin
    ContributorAuthor

    Addressed in #1565 at 5b6301d; exact-head self-review:#1565 (review). 587 passed in 201.44s (0:03:21); post-commit docs-current passed. Every-node/arrow decisions and actual output digests committed with explicit primary-source limits. Not independent approval. Close only after protected-main merge. Related1564 remains unresolved.

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