Make optimized rumen SynCom assay and genome-inference limits explicit #1655

CommunityMech:000398; DOI10.1186/s40168-025-02331-3. Preserve significant Group41 48h in vitro NDFD, predicted genome enzyme complement, and time-dependent in situ fermentation outcomes. Explicitly retain nonsignificant72h fiber-degradation trends, distinguish initial seven-strain designs from final five-member group and inoculum versus final-bottle concentrations, and avoid nine bags as nine independent animals. Full primary main text read. Preserve981 Fig7 evidence and prior workflow-arrow removal. Close only after protected-main merge.

Dedup:933 all-state issue titles/bodies and25 ignored/hidden-inclusive local matched files (git/docs/site/reference-cache excluded); matching258/650/981/1149/1150/1151 read. No exhaustive PR-comment audit. Source-based self-adversarial review is not independent approval.