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Separate Candida biofilm facilitation from rodent disease outcome #1772
Description
SMutans_CAlbicans_ECC_Biofilm.yaml (CommunityMech:000083; PMID24566629): preserve mutualism and Candida-associated biofilm facilitation. EPS/biomass evidence is in vitro; the lesion/carriage node is a community outcome, not pairwise colonization facilitation. Bound the existing biofilm-to-disease arrow as PARTIAL mediation and to the rodent model. Primary abstract and PubMed captions read; EuropePMC XML returned HTTP500. No new topology or wet-lab procedures.
Dedup: fresh all-state issue titles/bodies and ignored/hidden-inclusive local search with .git/docs/site/references_cache excluded; relevant caches separately inspected. Matching issues read, not duplicates of these findings. Comments/PRs not exhaustive. Source-based self-adversarial review, not independent approval. Graph-repair issues close only after protected-main merge.
Activity
realmarcin commentedon Oct 7, 2026
Addressed in #1777 at f74410c; exact-head self-review: #1777 (review). 888 passed in 507.98s (0:08:27); postcommit docs-current passed.44validation outputs/digests plus decisions and provenance are committed. Four records changed;all11nodes7directions retained. Two direct-result citations added after adversarial diff review, with append-only correction histories. Non-graph1776 and existing loader1703/Linux DOI-cache1091 remain unresolved. Not independent approval; close only after protected-main merge.