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Separate Suillus recruitment and vitamin transfer from untested causal mediation #1837

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Description

@realmarcin

Finding

CommunityMech:000312, PMID:41454778. Preserve directly supported bacterial-to-fungal thiamine transfer, fungal growth rescue, recruitment and pine performance. The full main results report labeled thiamine in fungal hyphae and increased pine dry weight, root activity and phosphorus; do not discard these positive findings. Distinguish ureidosuccinate chemotaxis from pregnenolone motility and measured cue effects from proven nutrient uptake. Qualify recruitment as a prerequisite for vitamin induction and thiamine as the exclusive in-plant mediator. Preserve the existing three-direction topology and thiamine-free P20 context (#583); do not imply bacterial reciprocity is resolved.

Review Scope

Fresh primary XML and bounded main-text sections were read, not figure pixels, separate supplements or raw data. All five matching issue bodies were read. All-state title/body dedup and scoped ignored/hidden local searches found no duplicate of this finding; not every historical PR or comment was read.

Lifecycle

Address in the dependent batch107 PR; close only after protected-main merge. Self-adversarial review is not independent approval. No paid provider submission or new topology is included.

Activity

  1. realmarcin commented on Oct 8, 2026

    @realmarcin
    ContributorAuthor

    Addressed in #1842 at f1c2170; self-review: #1842 (review). 967 passed in 327.16s (0:05:27); postcommit docs-current passed. 42 gate outputs/digests, decisions, provenance and five append-only histories committed. All 13 nodes and seven qualified existing directions retained; two spatial arrows removed. All 31 reviewed quotations match fresh primary text and unchanged caches. HydDB provenance corrected with an append-only history; final gates rerun. Plain just-lint passed;explicit-runtime no-incremental mypy additionally checked. Identity #1841 remains open, spring stays needs_research. Not independent approval; close only after protected-main merge.

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