Separate benzoate conversion from mineralization and universal partner dependence #1874

Finding

CommunityMech:000071: acetate plus methane is not complete carbon mineralization. Rename the outcome and targets, ground graph benzoate as CHEBI:16150, and retain the distinct benzoate fermentation possible in pure culture. Do not import enzyme assays performed with Desulfovibrio or crotonate into the exact methanogenic pair. Preserve both existing arrows and move qualitative metabolite roles out of concentration fields.

Sources And Limits

https://pubmed.ncbi.nlm.nih.gov/11722901/
https://pubmed.ncbi.nlm.nih.gov/11282627/

Whole seven canonical records were read. Four fresh extracted primary main bodies were read (2018proteome,2021coordination,2022ES5,2018nanomaterials). Older articles are bounded to fresh primary abstracts; the 2024 formate paper uses existing curator-supplied text, whose main content was read. No original figure pixels, separate supplements or raw data were audited. Full access/proof records will accompany batch112.

Fresh all-state title/body dedup matched #1392/#1389/#795/#583/#496/#259; their bodies and related #529/#183 were read. Ignored/hidden files were included in the recorded local search scope; historical reports and PR comments were not exhaustively read.

Lifecycle

Address in batch112; close only after protected-main merge. Source-based self-adversarial review, not independent approval. No new topology or paid Edison run.