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Reconcile residual non-graph syntrophy and ES5 kinetic claims with assay scope #1878

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Description

@realmarcin

Finding

Non-graph follow-up for batch112:000068/000069 taxonomy and narrative retain formate partial-pressure and broad partner-dependence language.000070 metadata retains an unverified numerical H2 threshold and broad obligacy.000188 non-graph claims should be checked against Table1 and the Discussion, rather than interpreting abstract-wide120%/150% as exact-triculture percent increases. Keep observed lag stimulation positive, distinguish slopes and final yields, and check the direction of methanogen protein changes. This issue does not authorize experimental optimization or new causal topology.

Sources And Limits

https://pubmed.ncbi.nlm.nih.gov/29611893/
https://pubmed.ncbi.nlm.nih.gov/16345745/
https://pubmed.ncbi.nlm.nih.gov/35699440/

Whole seven canonical records were read. Four fresh extracted primary main bodies were read (2018proteome,2021coordination,2022ES5,2018nanomaterials). Older articles are bounded to fresh primary abstracts; the 2024 formate paper uses existing curator-supplied text, whose main content was read. No original figure pixels, separate supplements or raw data were audited. Full access/proof records will accompany batch112.

Fresh all-state title/body dedup matched #1392/#1389/#795/#583/#496/#259; their bodies and related #529/#183 were read. Ignored/hidden files were included in the recorded local search scope; historical reports and PR comments were not exhaustively read.

Lifecycle

Remain open beyond graph-repair merge until separate metadata curation is verified. Source-based self-adversarial review, not independent approval. No new topology or paid Edison run.

Activity

  1. realmarcin commented on Oct 8, 2026

    @realmarcin
    ContributorAuthor

    Non-graph follow-up remains open. #1879 at 7a92057; self-review #1879 (review). 1014 passed in 381.37s (0:06:21); postcommit docs-current passed. Eight append-only histories, 70 gate outputs and five mutation probes recorded. Superseded failed runs are retained, not counted as passes. The unchanged #622 reference failure is explicitly excepted, not counted as a pass. Self-review is not independent approval.

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