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Ground tomato SynCom3 member evidence and cross-feeder roles to the exact community #1943

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Description

@realmarcin

Finding

The three canonical genus rows cite formation of the 38-member precursor and assign CROSS_FEEDER roles without metabolite-transfer evidence. The abstract separately identifies the three retained genera. Audit member-level evidence and functional roles without inferring strains or exchanged metabolites. Non-graph ingredient descriptions also imply each named divinyl ether is separately indispensable, whereas the inspected abstract supports perturbation of their biosynthetic branch. Detailed primary methods would resolve that distinction; a subscription-required metadata flag and failed publisher access are bounded access results, not proof that full text does not exist.

Evidence And Limits

https://pubmed.ncbi.nlm.nih.gov/37549573/

Four whole canonical records reviewed against three unique primary articles. Fresh abstracts and Crossref identities checked for all records; complete wheat C1/C6 and crown-rot main bodies read, including methods, results, discussion, table text and captions. C1/C6 retrievals have identical body hashes. Tomato changes are abstract-bounded: EuropePMC exposed no PMC article and the publisher open returned403. No exhaustive full-text absence claim, original figure-pixel or separate-supplement audit, raw-data reanalysis or new optimization protocol. Local searches include hidden/ignored files with credentials excluded; all-state issue titles/bodies checked.

Lifecycle

Separate non-graph follow-up; remain open until separately verified. Source-based self-adversarial review is not independent approval.

Activity

  1. realmarcin commented on Oct 8, 2026

    @realmarcin
    ContributorAuthor

    Research or non-graph follow-up remains open. #1946 at ec8ee08; self-review #1946 (review). 1146 passed in 406.93s (0:06:46); postcommit docs-current passed. Four append-only histories, 41 validation outputs and twelve mutation probes recorded. No new topology or Edison invocation in this batch; prior research extensions remain incomplete. Self-review is not independent approval.

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