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Element Biosciences

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  1. bases2fastq-nf bases2fastq-nf Public

    Bases2fastq-nf is a bioinformatics pipeline used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Nextflow 7 4

  2. cytoprofiling cytoprofiling Public

    Python and R libraries for processing cytoprofiling datasets from Element Biosciences

    Jupyter Notebook 7

  3. AvidityManuscript2023 AvidityManuscript2023 Public

    Jupyter Notebook 5

  4. cells2stats-nf cells2stats-nf Public

    Cells2stats-nf is a bioinformatics pipeline used to assign reads and generate cell statistics from the raw data produced by the Element AVITI24™ System using the Cells2Stats Software.

    Nextflow 2 1

  5. parabricks-nextflow parabricks-nextflow Public

    Forked from clara-parabricks-workflows/parabricks-nextflow

    Accelerated genomics workflows in NextFlow

    Nextflow 2

  6. sentieon-cli-nf sentieon-cli-nf Public

    Elembio Catalyst nextflow wrapper for sentieon-cli

    Groovy 2

Repositories

Showing 10 of 17 repositories
  • agent-skills Public

    TODO

    Elembio/agent-skills's past year of commit activity
    0 0 0 1 Updated Sep 9, 2026
  • configs Public

    custom elembio specific nextflow configs

    Elembio/configs's past year of commit activity
    Nextflow 0 Apache-2.0 0 0 0 Updated Aug 7, 2026
  • bases2fastq-nf Public

    Bases2fastq-nf is a bioinformatics pipeline used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Elembio/bases2fastq-nf's past year of commit activity
    Nextflow 7 Apache-2.0 4 0 0 Updated Aug 6, 2026
  • homebrew-tap Public

    Homebrew

    Elembio/homebrew-tap's past year of commit activity
    Shell 0 0 0 0 Updated Aug 5, 2026
  • cytoprofiling Public

    Python and R libraries for processing cytoprofiling datasets from Element Biosciences

    Elembio/cytoprofiling's past year of commit activity
    Jupyter Notebook 7 BSD-3-Clause 0 0 1 Updated Jul 30, 2026
  • cells2stats-nf Public

    Cells2stats-nf is a bioinformatics pipeline used to assign reads and generate cell statistics from the raw data produced by the Element AVITI24™ System using the Cells2Stats Software.

    Elembio/cells2stats-nf's past year of commit activity
    Nextflow 2 1 1 0 Updated Jul 28, 2026
  • dma_ip_drivers Public Forked from Xilinx/dma_ip_drivers

    Xilinx QDMA IP Drivers

    Elembio/dma_ip_drivers's past year of commit activity
    C 0 572 0 0 Updated Jun 29, 2026
  • MultiQC Public Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Elembio/MultiQC's past year of commit activity
    JavaScript 0 GPL-3.0 694 0 2 Updated May 9, 2026
  • parabricks-nextflow Public Forked from clara-parabricks-workflows/parabricks-nextflow

    Accelerated genomics workflows in NextFlow

    Elembio/parabricks-nextflow's past year of commit activity
    Nextflow 2 Apache-2.0 11 0 0 Updated Jan 16, 2026
  • bases2fastq-dx Public

    Bases2fastq-dx is A DNAnexus applet for building a DNAnexus bioinformatics workflow used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Elembio/bases2fastq-dx's past year of commit activity
    Shell 0 Apache-2.0 0 0 1 Updated Nov 4, 2025
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