Skip to content

Extended colorblind mode to remaining plots - #1341

Merged
adkinsrs merged 2 commits into
develfrom
324-add-colorblind-color-option-for-various-plotting-types
Oct 5, 2026
Merged

adkinsrs merged 2 commits into
develfrom
324-add-colorblind-color-option-for-various-plotting-types

Conversation

@adkinsrs

@adkinsrs adkinsrs commented Oct 5, 2026

Copy link
Copy Markdown
Member
  • Expanded colorblind mode in scanpy and clustering visualizations, ensuring colorblind-friendly palettes are used.
  • Enhanced the generate_tsne_figure function to maintain color palettes in colorblind mode.
  • Updated the build_bed_annotation_tracks function to allow colorblind-friendly colors for strand annotations.
  • Introduced tests for colorblind mode functionality in spatial and t-SNE visualizations.
  • Modified API endpoints to handle colorblind mode parameters, ensuring consistent behavior across the application.
  • Added colorblind mode handling in the analysis image retrieval process.
  • Ensured that colorblind copies of visualizations are created and managed appropriately.
  • Fixed a bug with get_embedded_tsne_display.cgi

- Expanded colorblind mode in scanpy and clustering visualizations, ensuring colorblind-friendly palettes are used.
- Enhanced the `generate_tsne_figure` function to maintain color palettes in colorblind mode.
- Updated the `build_bed_annotation_tracks` function to allow colorblind-friendly colors for strand annotations.
- Introduced tests for colorblind mode functionality in spatial and t-SNE visualizations.
- Modified API endpoints to handle colorblind mode parameters, ensuring consistent behavior across the application.
- Added colorblind mode handling in the analysis image retrieval process.
- Ensured that colorblind copies of visualizations are created and managed appropriately.
@adkinsrs adkinsrs linked an issue Oct 5, 2026 that may be closed by this pull request
@adkinsrs
adkinsrs merged commit 3735d0c into devel Oct 5, 2026
1 of 2 checks passed
@adkinsrs
adkinsrs deleted the 324-add-colorblind-color-option-for-various-plotting-types branch October 5, 2026 12:58
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

add colorblind color option for various plotting types

1 participant