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feat: added ntSynt and ntSynt-viz for synteny analysis + bug fix - #16

Merged

rabioinf merged 14 commits into

mainfrom

Sep 2, 2026

Commits on Apr 22, 2026
- chore: fix typo.
  rabioinf
  committed
  40bd62a
- fix: update bakta version.
  rabioinf
  committed
  3c3d61a
- feat: add synteny anlaysis and viz using ntSynt
  rabioinf
  committed
  af66e43
- fix: minor change in config
  rabioinf
  committed
  fa92fb8
- chore: update ref in README
  rabioinf
  committed
  4f0f416
Commits on Apr 23, 2026
- fix: forgot 'extra' parameter in synteny detection.
  rabioinf
  committed
  3afccf5
- fix: add ref to synteny if defined in config; added ref_sequence for testing; closes #17
  rabioinf
  committed
  49a451e
- fix: remove prefix param; closes #18
  rabioinf
  committed
  75f9965
- feat: add checkM tool; closes #14
  rabioinf
  committed
  3a0133a
Commits on Aug 25, 2026
- fix: formatting, early-fail on empty df, type enforcement for sample sheet
  m-jahn
  committed
  b8b013b
- fix: formatting, swap rsync with mv
  m-jahn
  committed
  2b142b7
- fix: container directive
  m-jahn
  committed
  6cd8742
Commits on Sep 2, 2026
- fix: dependency
  m-jahn
  committed
  90eb0ca
- fix: allow numeric strain and sample names
  m-jahn
  committed
  5f1e10c