VIBTOBIlab
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Repositories
- Shiny-DNAmBenchmarking Public
Shiny Application for DNAmBenchmarking paper doi: 10.1101/2025.11.27.688590
- BenchmarkingAnalysis Public
Repository containing scripts and tutorials to reproduce the benchmarking results.
- DecoNFlow Public
DecoNFlow is a bioinformatics analysis pipeline used for computational deconvolution of DNA methylation data. It allows deconvolution of samples using both reference-based and reference-free deconvolution tools.
- MethylSeq Public
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
- scRNAseq_InVitro_ImmuneStimulation Public
This repository encloses necessary code supporting the manuscript entitled "Stimulation strategy matters: A B-cell focused single-cell transcriptomic study on in vitro stimulated immune cells".
- methurator Public
Methurator is a Python package designed to estimate CpGs saturation for DNA methylation sequencing data.
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- VIBTOBIlab.github.io Public
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