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Update isospecpy requirement from ~=2.3.3 to ~=2.4.0 - #88

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Updates the requirements on isospecpy to permit the latest version.

Changelog

Sourced from isospecpy's changelog.

This file lists major changes between releases, for a full list see git log.

2.1.4

  • Add charge parameter in Python and R

2.1.3

  • Bugfix for large envelopes crashing under Python in specific circumstances
  • Implement stochastic envelopes in C++ and Python

2.1.2 (R-only release)

  • Workaround for CRAN threatening to remove package because of C++11 function usage, in spite of C++14 being clearly listed in SystemDependencies

2.1.1

  • Speed improvements
  • Bugfixes
  • Support for calculating basic statistics of FixedEnvelopes
  • Support for negative atom counts in formulas in Python. This is useful in conjunction with FASTA argument, to represent protein modification

2.1.0

  • Support for using nominal mass in calculations
  • FASTA file parsing
  • More speed improvements
  • Support for Wasserstein distance
  • Basic operations on fixed envelopes (addition, normalization, convolution...)

2.0.1 (R-only release)

  • Fix compilation of IsoSpecR on Windows

2.0.0

  • Major algorithmic improvements in IsoLayered
  • Added support for fixed envelopes, restored quicktrim option
  • R now returns probabilities instead of logprobabilites by default
  • Some API changes
  • Performance improvements and bugfixes all over the place

1.9.3 (C++/Python-only release)

  • Improve API and examples for radiolabelling in C++/Python

1.9.2

  • Mostly documentation improvements

... (truncated)

Commits
  • f11d056 Merge pull request #66 from michalsta/main
  • d483057 Merge ci_wheels: fix wheel-test CI hang and add hang guardrails
  • c173f60 Stop feeding per-call array sizes into cffi type strings (real fix for the wh...
  • 11ef4b2 CI: bound wheel-test hang risk and remove lazy-init locks on the first-call path
  • fd8a5d1 Missing files
  • af53463 More CI work
  • 759258b More CI fixes
  • b335b50 CI fixes
  • 323f012 Help clang's optimizer a bit
  • eb02a99 Optimizations
  • Additional commits viewable in compare view

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Updates the requirements on [isospecpy](https://github.com/MatteoLacki/IsoSpec) to permit the latest version.
- [Changelog](https://github.com/MatteoLacki/IsoSpec/blob/main/CHANGELOG)
- [Commits](MatteoLacki/IsoSpec@v2.3.3...v2.4.0)

---
updated-dependencies:
- dependency-name: isospecpy
  dependency-version: 2.4.0
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python Pull requests that update python code labels Aug 31, 2026
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