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Release 1.5.0 - #21

Merged

jahnzh merged 24 commits into

mainfrom

test

Jul 7, 2026

Merged

Release 1.5.0#21
jahnzh merged 24 commits into
mainfrom
test

Commits on Jul 7, 2026
- Add pre-commit hooks (Ruff + fixers) with CI enforcement
  
  jahnzh
  and
  claude
  committed
  42e27ea
- Apply Ruff format + hooks normalization across the repo
  
  jahnzh
  and
  claude
  committed
  efd7940
- Drop Python 3.8 and 3.9 support (minimum is now 3.10)
  
  jahnzh
  and
  claude
  committed
  29a3c72
- Merge pull request #17 from csi-greifflab/feature/pre-commit-hooks
  jahnzh
  authored
  53cbe1c
- Add GHCR Docker publishing to test and main release workflows.
  
  jahnzh
  and
  cursoragent
  committed
  c31fbd0
- Address review: remove git dep, exclude tests, add --user flag, defer release to after Docker publish
  Copilot
  authored
  6325e62
- Merge branch 'test' into feature/docker-ghcr-publish
  jahnzh
  authored
  a3dc8dd
- Fix trailing whitespace in publish-main-branch-trusted.yml
  Copilot
  authored
  e84f3a0
- Merge pull request #18 from csi-greifflab/feature/docker-ghcr-publish
  jahnzh
  authored
  5d132b8
- Add METL 1D embeddings via optional metl-pretrained extra.
  
  jahnzh
  and
  cursoragent
  committed
  8e1ab5e
- docs: document METL 1D optional backend in README.
  
  jahnzh
  and
  cursoragent
  committed
  a096e4e
- docs: refine METL README with install and library examples.
  
  jahnzh
  and
  cursoragent
  committed
  b8c8620
- Merge branch 'test' into feat/metl-1d-embeddings
  jahnzh
  authored
  76b9859
- Fix METL layer-hook mapping and default layer selection
  jahnzh
  committed
  f564919
- fix pre-commit lint formatting failures
  Copilot
  authored
  0b7b073
- fix: address PR review feedback for METL dispatch and CI gating
  Copilot
  authored
  262fa3a
- Merge pull request #19 from csi-greifflab/feat/metl-1d-embeddings
  jahnzh
  authored
  b5fbd59
- Initial plan
  Copilot
  authored
  918e9bf
- Merge remote-tracking branch 'origin/test' into copilot/fix-build-and-publish-test
  Copilot
  authored
  1f8091f
- Fix TestPyPI publish failure: remove git URL from metl optional dependency
  Copilot
  authored
  39c6efc
- Add permissions: contents read to test.yml workflow (CodeQL fix)
  Copilot
  authored
  0d4571b
- Merge pull request #20 from csi-greifflab/copilot/fix-build-and-publish-test
  jahnzh
  authored
  4cd517d
- Release 1.5.0: bump version and cut changelog section.
  
  jahnzh
  and
  claude
  committed
  cf1e7fa
- Fix METL review findings for dispatch and reconstruction
  Copilot
  authored
  f5cfe39

Commits

Commits on Jul 7, 2026