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learning-bioinformatics-at-home
learning-bioinformatics-at-home Publicresources for learning bioinformatics
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bioinformatics-coffee-hour
bioinformatics-coffee-hour PublicShort lessons from FAS Informatics coffee hour
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GenomeAnnotation
GenomeAnnotation PublicBest practices and workflow for genome annotation
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- scRNAseq-preprocessing Public
Documentation of and code for analyses performed to assess the effect of different methods for cleanup and pre-processing of raw scRNAseq data on downtream analyses.
- EndoriftiaTranscriptomics Public
Code used in data analysis for Mitchell et al. 2024, a forthcoming paper on transcriptomic responses to environmental variation in *Candidatus Endoriftia persephone*, a bacterial symbiont of the deep sea tubeworm *Riftia pachyptila*.
- data-concierge-file-audit Public
Claude Code skill: read-only audit of a lab's FASRC storage for FAS Informatics Data Concierge
- snparcher Public
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
- NEMO-CE-7.2.11 Public
- NEMO-CE-7.4.17 Public
- NEMO-CE2 Public
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