[hyperpolymath]

Removes the React Evidence surface and keeps the Evidence API, per the owner's ruling on #7: the semantics belong to the theory track, and the browser implementation is being rewritten for the Vue/Marid client, so the React one should not sit in the tree in the meantime.

What goes

Path	Lines
frontend/src/evidence/ (10 files)	2401
frontend/src/components/EvidenceModeToggle.tsx	21
api.evidence namespace in frontend/src/api/client.ts	31
evidence tab in RunView.tsx	—

What stays

src/core/evidence.jl, src/server/routes/evidence.jl, test/unit/test_evidence.jl, test/unit/test_evidence_routes.jl. The claim schema (scope 1–50 values ≤200 chars, text ≤2000, ≤5 warrants, ≤20 caveats, blank status → draft, supported requires ≥1 of measurement/citation/inference), the echo verdicts, containment labels and residual arithmetic are untouched and still covered by the Julia suite.

Side effect on #7's actual complaint

EvidenceModeToggle gated the placement CladeCumulusPanel in the Trees view — "Evidence Mode currently gates Advanced and CladeCumulus". With the toggle gone that panel renders unconditionally, so the gating the issue describes no longer exists.

Contract for the Marid client

The README ### Evidence Mode (API) section now documents the endpoints and the server-enforced validation rules instead of the three removed views.

Verification

• tsc --noEmit -p . — clean
• 10 remaining frontend test files — 169 assertions, 0 failures
• vite build — succeeds

The deleted evidence.test.ts covered the UI claim helpers; the rules it mirrored stay tested on the server. This branch is also rebased onto current main, and replaces #212 (closed as superseded — every repair it carried landed on main via #208–#216).

[chatgpt-codex-connector]

Codex Review Summary

This comment shows the latest Codex review activity on this pull request.

Review	Status	Commit	Review trigger
📝 Code Review	⚠️ Failed 2026-10-23T01:09:49.857478Z We couldn’t complete this review. Comment @codex review to try again.	102ede3	PR opened

ℹ️ About Codex in GitHub

Your team has set up Codex to review pull requests in this repo. Reviews are triggered when you

• Open a pull request for review
• Mark a draft as ready
• Comment "@codex review" or "@codex security review".

Codex reacts with 👀 while any review is running, comments if it has suggestions, and reacts with 👍 once all reviews finish with no findings.

[chatgpt-codex-connector]

You have reached your Codex usage limits for code reviews. You can see your limits in the Codex usage dashboard.
To continue using code reviews, you can upgrade your account or add credits to your account and enable them for code reviews in your settings.

[coderabbitai]

Warning

Review limit reached

You've used all free OSS reviews for now. Wait for the free limit to reset to keep reviewing this public repository.

Next included review available in 14 minutes.

Check out review usage here.

View limit details

Limit details: You’ve used the included review currently available.

Learn how review limits work.

Review configuration:

⚙️ Run configuration

• Source mode: Auto
• Repository: Unavailable
• Branch: Unavailable
• File: No configuration file from this repository applied
• Commit: Unavailable
• Layers: Organization UI
• Review profile: ASSERTIVE
• Plan: Advanced
• Run ID: e0f893ba-48b5-4165-b484-9ab4b314c5fe

📥 Commits

Reviewing files that changed from the base of the PR and between 7bb716d and 102ede3.

📒 Files selected for processing: 15

• README.md
• frontend/src/api/client.ts
• frontend/src/components/EvidenceModeToggle.tsx
• frontend/src/evidence/ClaimEditor.tsx
• frontend/src/evidence/EvidencePanel.tsx
• frontend/src/evidence/FiberEcho.tsx
• frontend/src/evidence/ProjectionControls.tsx
• frontend/src/evidence/ResidualExplorer.tsx
• frontend/src/evidence/claims.ts
• frontend/src/evidence/evidence.test.ts
• frontend/src/evidence/figures.ts
• frontend/src/evidence/types.ts
• frontend/src/evidence/ui.tsx
• frontend/src/views/RunView.tsx
• frontend/src/views/StudyView.tsx

• Autofix · Keep fixing CodeRabbit findings and required CI, and resolving merge conflicts

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

• X
• Mastodon
• Reddit
• LinkedIn

_{Comment @coderabbitai help to get the list of available commands.}

[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

[github-actions]

Fork governance

Lane	Status	Run
DEED syntax (repo deed)	🟢 conformant	run 39882414397
Hypatia verdict grid	purple (job: success)	same run

🟣 critical · commit 102ede3e96b0 · run 39882414397

Reporter	Status	Critical	High	Medium	Minor	Since previous revision
Hypatia scan	🟣 critical	43	63	31	0	— no comparable baseline
panic-attack assail	🔴 high	0	6	13	0	— no comparable baseline
pons asinorum	🟡 medium	0	0	10	0	— no comparable baseline
rhodibot (RSR compliance)	🟠 indeterminate	0	0	0	0	— no comparable baseline
panicbot (panic recovery, error handling)	🟠 indeterminate	0	0	0	0	— no comparable baseline
echidnabot (formal verification: proofs/)	🟠 indeterminate	0	0	0	0	— no comparable baseline
seambot (integration health: API routes)	🟠 indeterminate	0	0	0	0	— no comparable baseline
finishingbot (release readiness)	🟠 indeterminate	0	0	0	0	— no comparable baseline
accessibilitybot (WCAG on the React UI)	🟠 indeterminate	0	0	0	0	— no comparable baseline
glambot (presentation quality)	🟠 indeterminate	0	0	0	0	— no comparable baseline
cipherbot	⚪ not applicable	0	0	0	0	— no comparable baseline
sustainabot	⚪ not applicable	0	0	0	0	— no comparable baseline

Hypatia scan: 137 finding(s)

• critical cicd_rules/banned_language_file — frontend/src/views/run/parseFilterYaml.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/encode.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/charts.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/export.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/figure.test.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/legend.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/figure/types.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/utils/download.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/utils/text.test.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/utils/timeago.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/utils/text.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useUnsavedGuard.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useApi.test.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useApi.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useAnalysis.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useSSE.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useTabParam.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useNavRefresh.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/hooks/useJobEvents.ts — TypeScript file detected -- banned language
• critical cicd_rules/banned_language_file — frontend/src/about.ts — TypeScript file detected -- banned language
• 117 more; see the structured report in the artifact.

panic-attack assail: 19 finding(s)

• high DynamicCodeExecution — src/pipeline/dada2/context.jl — eval/Meta.parse in src/pipeline/dada2/context.jl
• high DynamicCodeExecution — src/analysis/analysis.jl — eval/Meta.parse in src/analysis/analysis.jl
• high DynamicCodeExecution — src/analysis/differential.jl — eval/Meta.parse in src/analysis/differential.jl
• high DynamicCodeExecution — src/core/provenance.jl — eval/Meta.parse in src/core/provenance.jl
• high DynamicCodeExecution — scripts/check-julia-syntax.jl — eval/Meta.parse in scripts/check-julia-syntax.jl
• high DynamicCodeExecution — test/unit/test_permanova.jl — eval/Meta.parse in test/unit/test_permanova.jl
• medium UnsafeFFI — src/core/memory_probe.jl — 3 ccall/FFI calls in src/core/memory_probe.jl
• medium InputBoundary — src/server/routes/runs.jl — 2 JSON3.read/JSON.parse call(s) with 0 try block(s) in src/server/routes/runs.jl — these throw on malformed input; wrap in try/catch
• medium InputBoundary — src/server/routes/composition.jl — 6 JSON3.read/JSON.parse call(s) with 2 try block(s) in src/server/routes/composition.jl — these throw on malformed input; wrap in try/catch
• medium InputBoundary — src/server/routes/studies.jl — 4 JSON3.read/JSON.parse call(s) with 2 try block(s) in src/server/routes/studies.jl — these throw on malformed input; wrap in try/catch
• medium InputBoundary — src/server/routes/analysis.jl — 9 JSON3.read/JSON.parse call(s) with 3 try block(s) in src/server/routes/analysis.jl — these throw on malformed input; wrap in try/catch
• medium UnsafeFFI — install.jl — 1 ccall/FFI calls in install.jl
• medium ProofDrift — test/unit/test_occupancy_grade.jl — 2 `@test x isa Y` assertion(s) with no value check — type-only tests may substitute for an unwritten formal theorem in test/unit/test_occupancy_grade.jl
• medium ProofDrift — test/unit/test_evidence.jl — 1 `@test x isa Y` assertion(s) with no value check — type-only tests may substitute for an unwritten formal theorem in test/unit/test_evidence.jl
• medium InputBoundary — bench/advanced_zero_handling/benchmark.jl — 1 JSON3.read/JSON.parse call(s) with 0 try block(s) in bench/advanced_zero_handling/benchmark.jl — these throw on malformed input; wrap in try/catch
• medium InputBoundary — frontend/src/figure/charts.ts — 1 JSON.parse call(s) with 0 try block(s) in frontend/src/figure/charts.ts — JSON.parse throws SyntaxError on malformed input; wrap in try-catch
• medium InputBoundary — frontend/src/tree/model.ts — 1 JSON.parse call(s) with 0 try block(s) in frontend/src/tree/model.ts — JSON.parse throws SyntaxError on malformed input; wrap in try-catch
• medium InputBoundary — frontend/src/api/events.ts — 2 JSON.parse call(s) with 0 try block(s) in frontend/src/api/events.ts — JSON.parse throws SyntaxError on malformed input; wrap in try-catch
• medium InputBoundary — frontend/src/components/alphaMetrics.tsx — 1 JSON.parse call(s) with 0 try block(s) in frontend/src/components/alphaMetrics.tsx — JSON.parse throws SyntaxError on malformed input; wrap in try-catch

pons asinorum: 10 finding(s)

• medium string-concat-in-loop — ./frontend/src/tree/model.ts:122 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/model.ts:118 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:69 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:66 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:61 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:53 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:43 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium string-concat-in-loop — ./frontend/src/tree/TreeShapes.tsx:42 — string built by repeated concatenation in a loop (T0, HEURISTIC)
• medium unreachable-after-jump — ./frontend/src/figure/PaneEditor.tsx:45 — statement is unreachable after an unconditional jump (T0, HEURISTIC)
• medium unreachable-after-jump — ./frontend/src/components/PublicationTablesPanel.tsx:208 — statement is unreachable after an unconditional jump (T0, HEURISTIC)

rhodibot (RSR compliance): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

panicbot (panic recovery, error handling): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

echidnabot (formal verification: proofs/): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

seambot (integration health: API routes): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

finishingbot (release readiness): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

accessibilitybot (WCAG on the React UI): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

glambot (presentation quality): not_run — enrolled, but no report-back was received

• 🟠 indeterminate: enrolled, but no report-back was received

cipherbot: not_applicable — no cryptography is implemented in this repository

• ⚪ not applicable: no cryptography is implemented in this repository

sustainabot: not_applicable — fleet adapter slot reserved; no adapter exists yet (gitbot-fleet README)

• ⚪ not applicable: fleet adapter slot reserved; no adapter exists yet (gitbot-fleet README)

Scope: static findings reported by each row's tool at the named commit. Purple, red, yellow and blue grade the worst finding present; orange is evidence missing, malformed or a scanner that did not run; grey is an explicit scope exclusion with its reason. No row is a security certification. report.json, badge.json and the raw findings are in the verdict-grid artifact on the linked run.