Selecting Contigs

ABOVE: Assembled contigs aligned to a plasmid. Contigs 8 and 356 have been selected, and are displayed along with their orientation and length in the contig list section. GC content has been selected from a drop down menu (colour options) and the GC content of both contigs is displayed. Contigs on the canvas are now also coloured according to their GC content. Contigs with 60% or greater GC content are coloured red, contigs with 40% or lower GC content are coloured purple, contigs in-between are coloured on a gradient between red and purple. Selected contigs are outlined with a yellow box.