Issues

• Stricter handling of nf-test outputs

  nf-core/nft-utils#92 · Filter by author d4straub opened on Sep 17, 2026
  1

• sanitizeOutput still hashes the CWD for empty strings in 1.1.1

  nf-core/nft-utils#87 · Filter by author matthdsm opened on Sep 8, 2026

• Bubble up some more errors

  nf-core/nft-utils#73 · Filter by author DLBPointon opened on Jul 27, 2026

• cleanup options

  nf-core/nft-utils#67 · Filter by author maxulysse opened on Apr 24, 2026

• Helper for pipeline level tests

  nf-core/nft-utils#66 · Filter by author maxulysse opened on Apr 9, 2026

• filterNextflowOutput could benefit from some extra common patterns

  nf-core/nft-utils#59 · Filter by author maxulysse opened on Dec 17, 2025
  1

• Wrong capture of hash with filterNextflowOutput

  nf-core/nft-utils#58 · Filter by author maxulysse opened on Dec 17, 2025

• Sane defaults for .nftignore files

  nf-core/nft-utils#49 · Filter by author edmundmiller opened on Sep 17, 2025
  1

• getAllFilesFromDir() examples are confusing due to incomaptibliity of *.name pattern and relative: true

  nf-core/nft-utils#40 · Filter by author jfy133 opened on Jun 12, 2025

• Function to remove specific lines from a file (and return an ArrayList)

  nf-core/nft-utils#39 · Filter by author MarieLataretu opened on Jun 11, 2025

• getAllFilesFromDir includeDir and exclude pattern are not comaptible with each other

  nf-core/nft-utils#33 · Filter by author jfy133 opened on Mar 21, 2025 · 0.0.5
  1

• Make a function to have a better syntax for snapshotting variable files in a channel emitting a directory

  nf-core/nft-utils#32 · Filter by author maxulysse opened on Feb 10, 2025 · 0.0.5
  

• Function to get MD5sums of all files in directory that is an emitted element from a channel

  nf-core/nft-utils#30 · Filter by author jfy133 opened on Jan 16, 2025 · 0.0.5
  6

• Function to recursively check all detected files for a specific string

  nf-core/nft-utils#23 · Filter by author jfy133 opened on Oct 11, 2024 · 0.0.5
  2