Unified Python toolkit for genome editing workflows: CRISPR, base editing, and prime editing. GeneOps is building a consistent foundation for guide design, scoring, outcome modeling, and analysis.
GeneOps is an open-source Python library that provides shared core primitives and pipelines for genome editing tasks, including:
- CRISPR guide RNA design
- Off-target discovery and scoring
- Nuclease and PAM constraint modeling
- Edit outcome prediction (indels, base edits, prime edits)
- QC and downstream analysis
# Create virtual env
python3 -m venv .venv
# Install GeneOps
.venv/bin/python -m pip install -e .Public running docs: geneops.linearfox.com.
Documentation source lives in docs/.
.venv/bin/python -m pip install -e ".[test,docs]"
.venv/bin/python -m mkdocs serveContributions are welcome! Please open issues or pull requests on the GitHub repository.
Contact: ntfargo@proton.me