bib-monitor: 1 new publication(s) 2026-10-02

[antagomir]

Automated bibliography scan (email + PubMed). One new entry survived filtering.

• Vogtmann2026 — "Importance of faecal sample collection in prospective cohort studies to evaluate the effect of the gut microbiome on cancer development", The Lancet Microbe, DOI 10.1016/j.lanmic.2026.101525
  • Found in: two new "BIB:" forwards from Leo (2026-10-01) — an Elsevier "Share your article [LANMIC_101525]" notice and a co-author thread announcing the paper's publication; cross-confirmed via PubMed (PMID 42822491, author "Lahti L", last 60 days)
  • pubclass = {A2} — PubMed lists it as a Review (a synthesis across 18 prospective cohorts proposing a research agenda, not primary data)
  • keywords = {bioscience} — gut microbiome / cancer epidemiology, matches the tagging of similar entries
  • entrysubtype = {review} — set alongside pubclass A2, consistent with Papoutsoglou2023's tagging
  • Leo's affiliation in the record (Department of Computing, University of Turku) and co-authors (Aki S. Havulinna, Teemu Niiranen, Veikko Salomaa — his regular FINRISK/Finnish-cohort collaborators) confirm this is the right Leo Lahti
  • Author forms: reused the exact existing forms for "Aki S. Havulinna", "Teemu Niiranen", "Veikko Salomaa", and "Alexandra Zhernakova" already in lahti.bib; all other co-author names taken verbatim from the PubMed record (no invented given names or expanded initials)
  • No volume/issue/full page range yet (published online ahead of print); pages = {101525} is the article number from the record

Also checked and found already recorded (no action needed):

• Elsevier "Share your article [CLNESP_105108]" and the Genome Biology "Decision" threads — already labeled bib/processed from the prior run, and already recorded (Zhang2026) or already covered by open PR bib-monitor: 1 publication update 2026-09-30 #334 (EscobarZepeda2025 in-press update)
• PubMed, author "Lahti L[Author]", last 60 days: 8 hits, 7 already present in lahti.bib (Yeo2026 iScience-obesity, Zhang2026, Joint-RPCA, the Parkinson's EV paper, the salivary microbiome paper, the sepsis msystems paper, the oat/SCFA paper); the 8th is the Vogtmann2026 entry above
• No open bib-candidates issue from the "Find new publications" GitHub Action
• DOI 10.64898/2026.07.03.26357002 (Lindgren2026allergic) is already proposed in open PR bib-monitor: 1 new publication(s) 2026-09-27 #331 from a bib-monitor/ branch, so it was not re-proposed here

Not added — a submission, not yet published: a co-author thread ("Updated manuscript for submission at Lancet Microbe") turned out to be the same Lancet Microbe paper above, now published, so no separate submitted-only entry was needed.

This sandbox's network egress policy blocks ORCID, Crossref, the DOI resolver, bioRxiv and arXiv directly, so PubMed and email were the only sources checked here as intended; the daily GitHub Action covers ORCID/Crossref/arXiv separately.

After merging, run publication-list.sh locally to refresh the Seafile list.

🤖 Generated with Claude Code

https://claude.ai/code/session_01A95589Pxbxejv5vL5hjeSo

---

Generated by Claude Code