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70 changes: 49 additions & 21 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -1,32 +1,60 @@
# History files
# R and RStudio local state
.Rhistory
.Rapp.history
# Session Data files
.RData
# User-specific files
.RDataTmp
.Ruserdata
# Example code in package build process
.Rproj.user/
*.Rproj
.Renviron

# R serialized data
*.rds
*.RDS
*.rda
*.RData

# R build and check output
*-Ex.R
# Output files from R CMD build
/*.tar.gz
# Output files from R CMD check
/*.Rcheck/
# RStudio files
.Rproj.user/
# produced vignettes
vignettes/*.html
vignettes/*.pdf
# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth
# knitr and R markdown default cache directories
*_cache/
/cache/
# Temporary files created by R markdown
*.utf8.md
*.knit.md
# R Environment Variables
.Renviron
.Rproj.user
*.Rproj
Stringendo.Rproj
Stringendo.Rproj
vignettes/*.html
vignettes/*.pdf

# Authentication and deployment metadata
.httr-oauth
rsconnect/

# Generated package documentation
docs/

# Translation temporary files
po/*~

# Accidental analysis output
*.pdf
*.png

# Local aliases and links
*alias

# macOS Finder metadata
.DS_Store
.DS_Store?
._*
.Spotlight-V100
.Trashes

# Windows metadata
Thumbs.db
ehthumbs.db

# Linux/HPC core dumps
core
core.*
core-*
*.core
4 changes: 2 additions & 2 deletions CITATION.cff
Original file line number Diff line number Diff line change
@@ -1,12 +1,12 @@
cff-version: 1.2.0
title: vertesy/Stringendo
version: v0.8.5
version: v1.1.1
message: >-
If you use this software, please cite it using these metadata.
type: software
authors:
- given-names: Abel
family-names: Vertesy
email: abel.vertesy@imba.oeaw.ac.at
email: av@imba.oeaw.ac.at
affiliation: IMBA
orcid: 'https://orcid.org/0000-0001-6075-5702'
8 changes: 3 additions & 5 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,10 +1,8 @@
Package: Stringendo
Title: Stringendo - string parser
Version: 0.8.5
Title: Stringendo - string manipulation utilities
Version: 1.1.1
Authors@R:
person("Abel", "Vertesy", , "av@imba.oeaw.ac.at", role = c("aut", "cre"))
Author: Abel Vertesy <av@imba.oeaw.ac.at> [aut, cre]
Maintainer: Abel Vertesy <av@imba.oeaw.ac.at> [cre]
Description: Stringendo is a set of R functions to parse strings from
variables and to manipulate strings.
License: GPL-3 + file LICENSE
Expand All @@ -20,6 +18,6 @@ Suggests:
devtools,
testthat
Encoding: UTF-8
Packaged: 2025-08-05 15:28:06.697097
Packaged: 2025-12-03 10:56:21.465331
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Empty file added Development/CITATION.cff
Empty file.
141 changes: 0 additions & 141 deletions Development/Create_the_Stringendo_Package.OLD.R

This file was deleted.

7 changes: 5 additions & 2 deletions Development/Create_the_Stringendo_Package.R
Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,12 @@ source(config.path)
# install.packages('ggExtra')
require(PackageTools)


PackageTools::document_and_create_package(repository.dir, config_file = 'config.R')
'git add commit push to remote'



# Install your package ------------------------------------------------
"disable rprofile by"
rprofile()
Expand Down Expand Up @@ -82,8 +84,8 @@ if (F) {
for (scriptX in ls.scripts.full.path) {
PackageTools::list_of_funs_to_markdown(scriptX)
}
file.edit(paste0(repository.dir, "R/list.of.functions.in.", package.name, ".det.md"))
file.edit(paste0(repository.dir, "README.md"))
file.edit(paste0(repository.dir, "/R/list.of.functions.in.", package.name, ".det.md"))
file.edit(paste0(repository.dir, "/README.md"))
file.remove(paste0(repository.dir, "/R/list.of.functions.in.", package.name, ".det.md"))

r$PackageTools()
Expand All @@ -99,6 +101,7 @@ for (scriptX in ls.scripts.full.path) {
}


PackageTools::document_and_create_package(repository.dir, config_file = 'config.R')



4 changes: 2 additions & 2 deletions Development/config.R
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@

DESCRIPTION <- list(
package.name = "Stringendo",
version = "0.8.5",
title = "Stringendo - string parser",
version = "1.1.1",
title = "Stringendo - string manipulation utilities",
description = "Stringendo is a set of R functions to parse strings from variables and to manipulate strings.",

depends = "base",
Expand Down
7 changes: 4 additions & 3 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -31,17 +31,17 @@ export(fix_special_characters_bash)
export(flag.name_value)
export(flag.nameiftrue)
export(flag.names_list)
export(flag.names_list.all.new)
export(format_number_h)
export(idate)
export(ifExistsAndTrue)
export(ifExistsElse)
export(imessage)
export(iprint)
export(is.character.or.NULL)
export(is.numeric.or.logical)
export(knl)
export(kollapse)
export(kpipe)
export(kpnl)
export(kpp)
export(kppc)
export(kppd)
Expand All @@ -59,10 +59,11 @@ export(parseParamStringWNames)
export(parsepvalue)
export(percentage_formatter)
export(percentile2value)
export(pnl)
export(ppc)
export(ppcol)
export(ppd)
export(ppipe)
export(ppnl)
export(ppp)
export(pps)
export(ppu)
Expand Down
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