Restore mirToRanges functionality - #36

Merged

LiNk-NY merged 12 commits into

develfrom

Nov 11, 2025

Commits on Nov 10, 2025

restore use of mirToRanges
LiNk-NY
committed
c094feb
create helper to identify viable assays
LiNk-NY
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7c7be7d
use miRNAmeConverter to translate and map miRNA IDs
LiNk-NY
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8df0b1d
update authors in simplifyTCGA
LiNk-NY
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502b76c
check for Bioc.gff installation in mirToRanges
LiNk-NY
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4c037bd
fix .getRangesOfMir check
LiNk-NY
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53d5c13
use default "hg19" for .get_hsa_gff3
LiNk-NY
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742bfb3

Commits on Nov 11, 2025

match tolower for rowIdx
LiNk-NY
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5a8dc77
separate .makeMiRNAListRanges from .makeListRanges
LiNk-NY
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c211a01
simplify and use rowidx for mcols col
LiNk-NY
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f086dce
use assay instead of x[[i]]
LiNk-NY
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87e31a6
use utils::tail
LiNk-NY
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140490c