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- Also reorder integer handling to prevent unintended conversion from int to float - Add tests for new function and integer handling
- Keep full phs accession to help detect when metadata needs to be reviewed again (rather than keeping previous curated values) - Add columns and assign curation groups to assist curation in the merged dbGaP output TSV - Add one-time step to backfill legacy dbGaP output with full accessions for compatibility - Update config with new field and to remove outdated merge_title_review
Clarifies the use of deterministic UUID5 values for dbGaP studies. Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
- Add main dbGaP input CSV and subsets downloaded 2026-10-02 - Update GPA and DOC lookup tables
…BIIT/INS-Data into ins-1715-update-dbgap-oct-2026
- Add new dbGaP results and result set merged with previous curation - Add bulk json results from dbGaP APIs and API error logs
- Move publication URLs to study_links for two datasets and unpack PMIDs - Add filler text for CCSS PMIDs pointing to Related Links - Fix minor typo "and and"
INS-1715: Update dbGaP Oct 2026
INS-1712: DCEG cohorts Sept 2026
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Closing PR and recreating because this one directed at |
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Update the submitted/curated inputs and processed outputs for the NCCR Data Platform datasets for INS.