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• Fix remapping correctness and validate release installation routes

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• Fix remapping correctness and validate release installation routes

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• Fix remapping correctness and validate release installation routes

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• Fix remapping correctness and validate release installation routes

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• Fix remapping correctness and validate release installation routes

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• Fix remapping correctness and validate release installation routes

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  fix/release-installation-validation

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• Restore analysis parity and correct integrated workflow behavior (#140)

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• Restore analysis parity and correct integrated workflow behavior

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  fix/integration-readiness

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• Restore analysis parity and correct integrated workflow behavior

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• Fix single-cell counting semantics and harden numerical parity validation

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  Documentation#105:Pull request#138synchronizebyJaureguy760
  fix/single-cell-archive-parity

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• Fix single-cell counting semantics and harden numerical parity validation

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• Restore RNA annotation defaults and parent grouping in Rust-backed analysis

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  fix/rna-annotation-parity

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• Restore RNA annotation defaults and parent grouping in Rust-backed analysis

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  Documentation#102:Pull request#139openedbyJaureguy760
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• Fix single-cell counting semantics and harden numerical parity validation

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• Fix single-cell counting semantics and harden numerical parity validation

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• Fix single-cell counting semantics and harden numerical parity validation

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• Merge pull request #137 from mcvickerlab/chore/cleanup-legacy-docker-…

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• Remove obsolete development research and AI workflow notes

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• Merge pull request #136 from mcvickerlab/chore/cleanup-parity-investi…

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• Remove bulk parity investigation artifacts

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• Merge pull request #133 from mcvickerlab/fix/donor-local-inference-20…

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• Add donor-local dispersion while preserving Python imbalance tests

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• Merge pull request #135 from mcvickerlab/fix/python-analysis-parity

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• Add donor-local dispersion while preserving Python imbalance tests

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  fix/donor-local-inference-20260721

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• Add donor-local dispersion while preserving Python imbalance tests

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  fix/donor-local-inference-20260721

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